Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Gm43047-201ENSMUST00000200089 3460 ntBASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Gm20832-201ENSMUST00000189076 665 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm36728-201ENSMUST00000195782 665 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm42581-201ENSMUST00000201774 966 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm45590-201ENSMUST00000209715 262 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 AC154271.1-201ENSMUST00000224780 383 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm11433-201ENSMUST00000118318 228 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm24895-201ENSMUST00000122742 74 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm27265-201ENSMUST00000183559 77 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm29492-201ENSMUST00000187124 457 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Col6a3E9PWQ3 Gm13903-201ENSMUST00000120945 193 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm22482-201ENSMUST00000122563 359 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm27313-201ENSMUST00000183500 142 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm29552-201ENSMUST00000190548 660 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 AC158395.1-201ENSMUST00000227206 452 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm11322-201ENSMUST00000118095 435 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm26001-201ENSMUST00000157989 103 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm26154-201ENSMUST00000102339 96 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm25543-201ENSMUST00000122678 312 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm44274-201ENSMUST00000203417 256 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Col6a3E9PWQ3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Gm21064-202ENSMUST00000190583 278 ntBASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Gm27517-201ENSMUST00000184347 236 ntBASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 AC121942.2-201ENSMUST00000223824 600 ntBASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Gm24151-201ENSMUST00000082758 141 ntBASIC0.76□□□□□ -2.29
Col6a3E9PWQ3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Gm24468-201ENSMUST00000104489 104 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Gm25805-201ENSMUST00000122788 108 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Gm2389-201ENSMUST00000160487 189 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Mir3089-201ENSMUST00000175350 84 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Gm27028-201ENSMUST00000182303 399 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 AC130222.1-201ENSMUST00000221198 256 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Gm17177-201ENSMUST00000169144 483 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC0.75□□□□□ -2.29
Col6a3E9PWQ3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm26354-201ENSMUST00000158221 129 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm26363-201ENSMUST00000158866 83 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm10038-201ENSMUST00000077233 441 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Snord49b-201ENSMUST00000082503 72 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm14899-201ENSMUST00000118673 548 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm14541-201ENSMUST00000118985 157 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm24878-201ENSMUST00000158782 104 ntBASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC0.74□□□□□ -2.29
Col6a3E9PWQ3 Gm17976-201ENSMUST00000184037 1909 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Gm14786-201ENSMUST00000117127 944 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Gm25141-201ENSMUST00000083177 107 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Gm16265-201ENSMUST00000134558 108 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Gm22563-201ENSMUST00000157333 269 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Col6a3E9PWQ3 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Col6a3E9PWQ3 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Col6a3E9PWQ3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.72□□□□□ -2.29
Col6a3E9PWQ3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Col6a3E9PWQ3 Gm24296-201ENSMUST00000158297 106 ntBASIC0.72□□□□□ -2.29
Col6a3E9PWQ3 Gm25994-201ENSMUST00000175392 101 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms