Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm26915-201ENSMUST00000183080 748 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Mir6993-201ENSMUST00000184912 65 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm43512-201ENSMUST00000198495 176 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm45071-201ENSMUST00000205353 571 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC164424.1-201ENSMUST00000221690 170 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm24252-201ENSMUST00000083700 132 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm14932-201ENSMUST00000117112 453 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm14923-201ENSMUST00000118270 155 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm28000-201ENSMUST00000184380 85 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm28344-201ENSMUST00000185704 279 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm28191-201ENSMUST00000189112 211 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm20811-201ENSMUST00000190500 553 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm18546-201ENSMUST00000197245 676 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm45150-201ENSMUST00000206051 467 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm18268-201ENSMUST00000208445 943 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm8940-201ENSMUST00000212585 219 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC158803.1-201ENSMUST00000219495 316 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l9-201ENSMUST00000101891 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm26504-201ENSMUST00000102033 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm6025-201ENSMUST00000121517 201 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm24915-201ENSMUST00000157288 78 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm24902-201ENSMUST00000158126 123 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm22136-201ENSMUST00000158751 268 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm26502-201ENSMUST00000177732 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l13-201ENSMUST00000177737 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm25350-201ENSMUST00000177849 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l15-201ENSMUST00000177940 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm23446-201ENSMUST00000177977 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l4-201ENSMUST00000177982 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm26201-201ENSMUST00000178047 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm24711-201ENSMUST00000178062 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm24609-201ENSMUST00000178166 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm23265-201ENSMUST00000178321 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm22812-201ENSMUST00000178329 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l3-201ENSMUST00000178370 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm26246-201ENSMUST00000178388 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm25155-201ENSMUST00000178450 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm24760-201ENSMUST00000178530 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm22285-201ENSMUST00000178576 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm22417-201ENSMUST00000178656 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l2-201ENSMUST00000178675 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm26270-201ENSMUST00000178690 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l16-201ENSMUST00000178777 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm23313-201ENSMUST00000178931 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l17-201ENSMUST00000178936 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm23089-201ENSMUST00000178947 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l10-201ENSMUST00000179053 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm24153-201ENSMUST00000179280 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm25597-201ENSMUST00000179388 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l1-201ENSMUST00000179518 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm23963-201ENSMUST00000179603 77 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm25816-201ENSMUST00000179764 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l8-201ENSMUST00000179889 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l7-201ENSMUST00000179895 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l5-201ENSMUST00000179927 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l6-201ENSMUST00000179955 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm26188-201ENSMUST00000179963 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm26433-201ENSMUST00000180227 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Snord116l11-201ENSMUST00000180312 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm22128-201ENSMUST00000180346 94 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm16399-201ENSMUST00000181423 219 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm27271-201ENSMUST00000183509 170 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm7329-201ENSMUST00000185915 210 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm33354-201ENSMUST00000195448 906 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm44459-201ENSMUST00000203926 160 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm44910-201ENSMUST00000208451 396 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm18645-201ENSMUST00000209593 651 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC159380.1-201ENSMUST00000218096 121 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm35558-202ENSMUST00000221819 499 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Trav4-3A0A0B4J1K1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms