Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Mir1195-201ENSMUST00000116818 98 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm649-201ENSMUST00000117284 1054 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm13510-201ENSMUST00000118659 429 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm14731-201ENSMUST00000119216 376 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm9001-201ENSMUST00000121642 399 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm12591-201ENSMUST00000122407 1177 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm22485-201ENSMUST00000157990 109 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm25958-201ENSMUST00000175114 71 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm18416-201ENSMUST00000175635 1003 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm18415-201ENSMUST00000177464 647 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm22862-201ENSMUST00000178593 121 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Mir8106-201ENSMUST00000184520 139 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm18775-201ENSMUST00000190763 586 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm18985-201ENSMUST00000196472 1079 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm44483-201ENSMUST00000197203 97 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm43171-201ENSMUST00000199882 291 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm44585-201ENSMUST00000207150 607 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm8940-201ENSMUST00000212585 219 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm19885-201ENSMUST00000212853 343 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 AC157017.2-201ENSMUST00000218354 777 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Olfr197-201ENSMUST00000080031 926 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm25788-201ENSMUST00000082721 131 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm24948-201ENSMUST00000082866 207 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm23727-201ENSMUST00000083352 164 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm25409-201ENSMUST00000083764 131 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.98□□□□□ -2.25
Trav4-2A0A075B638 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm11490-201ENSMUST00000118128 272 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm13454-201ENSMUST00000118166 483 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm15312-201ENSMUST00000118827 271 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm9703-201ENSMUST00000119573 343 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm15223-201ENSMUST00000120989 826 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Snrpert-201ENSMUST00000121967 279 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm24908-201ENSMUST00000157294 127 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm27493-201ENSMUST00000184128 78 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Mir6993-201ENSMUST00000184912 65 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm28755-201ENSMUST00000185773 199 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 AC147560.1-201ENSMUST00000197528 107 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm44232-201ENSMUST00000204537 225 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm45438-201ENSMUST00000210242 564 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 AC126672.1-201ENSMUST00000217096 396 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Gm46193-201ENSMUST00000219399 364 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Mir107-201ENSMUST00000083660 87 ntBASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Trav4-2A0A075B638 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm12765-201ENSMUST00000117273 615 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm11359-201ENSMUST00000120039 567 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm11430-201ENSMUST00000121317 217 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm11384-201ENSMUST00000121376 303 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm13502-201ENSMUST00000121574 684 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm15530-201ENSMUST00000122206 555 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm25624-201ENSMUST00000157222 275 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm22535-201ENSMUST00000158174 119 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm27722-201ENSMUST00000183908 76 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm29550-201ENSMUST00000185543 285 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm7299-201ENSMUST00000194441 581 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm43723-201ENSMUST00000196886 189 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm43007-201ENSMUST00000197618 291 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm44459-201ENSMUST00000203926 160 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Gm31849-201ENSMUST00000220306 375 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 AC160930.1-201ENSMUST00000227194 337 ntBASIC0.96□□□□□ -2.26
Trav4-2A0A075B638 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Trav4-2A0A075B638 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Trav4-2A0A075B638 Gm13343-201ENSMUST00000116474 105 ntBASIC0.95□□□□□ -2.26
Trav4-2A0A075B638 Gm14238-201ENSMUST00000120227 323 ntBASIC0.95□□□□□ -2.26
Trav4-2A0A075B638 Gm25666-201ENSMUST00000157702 107 ntBASIC0.95□□□□□ -2.26
Trav4-2A0A075B638 Gm38238-201ENSMUST00000194334 346 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms