Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm14301-201ENSMUST00000120181 324 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm23599-201ENSMUST00000157261 251 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm22563-201ENSMUST00000157333 269 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm24439-201ENSMUST00000157894 117 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm17538-201ENSMUST00000168236 327 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm25361-201ENSMUST00000179358 76 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm27532-201ENSMUST00000183726 113 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm28779-201ENSMUST00000189678 323 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm43804-201ENSMUST00000198280 456 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm45101-201ENSMUST00000208327 232 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Gm25199-201ENSMUST00000083095 104 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Mir137-201ENSMUST00000083635 73 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cldn3Q9Z0G9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm26247-201ENSMUST00000116702 91 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm14918-201ENSMUST00000118153 268 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm13085-201ENSMUST00000118356 171 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm14940-201ENSMUST00000119309 495 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm6574-201ENSMUST00000120037 362 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm11785-201ENSMUST00000120165 601 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm13720-201ENSMUST00000120741 196 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm11891-201ENSMUST00000121241 619 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm14765-201ENSMUST00000121954 326 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm14366-201ENSMUST00000121970 730 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm25270-201ENSMUST00000122606 138 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm23981-201ENSMUST00000157136 106 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm11392-201ENSMUST00000181419 710 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm37743-201ENSMUST00000194645 376 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm45395-201ENSMUST00000209891 559 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm22622-201ENSMUST00000082870 129 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm22229-201ENSMUST00000082987 108 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm23723-201ENSMUST00000082996 132 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Gm24817-201ENSMUST00000093672 105 ntBASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cldn3Q9Z0G9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm13510-201ENSMUST00000118659 429 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm22718-201ENSMUST00000122701 315 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm23588-201ENSMUST00000157659 99 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Mir6916-201ENSMUST00000184514 63 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm29216-201ENSMUST00000187117 492 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cldn3Q9Z0G9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm43245-201ENSMUST00000197603 468 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm44472-201ENSMUST00000204922 943 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm45288-201ENSMUST00000210236 151 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm45772-201ENSMUST00000212961 240 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.54□□□□□ -2
Cldn3Q9Z0G9 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm4945-201ENSMUST00000075152 453 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm24150-201ENSMUST00000082759 104 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm24948-201ENSMUST00000082866 207 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.54□□□□□ -2
Cldn3Q9Z0G9 Gm15175-201ENSMUST00000117629 132 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm13602-201ENSMUST00000122405 493 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm26401-201ENSMUST00000158502 76 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm23704-201ENSMUST00000158844 340 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Mir6363-201ENSMUST00000184880 114 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm2676-201ENSMUST00000207279 606 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.53□□□□□ -2
Cldn3Q9Z0G9 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cldn3Q9Z0G9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm25586-201ENSMUST00000082499 112 ntBASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Cldn3Q9Z0G9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms