Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Mir28a-201ENSMUST00000083560 86 ntBASIC3.51□□□□□ -1.85
Col13a1Q9R1N9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.51□□□□□ -1.85
Col13a1Q9R1N9 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col13a1Q9R1N9 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.51□□□□□ -1.85
Col13a1Q9R1N9 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col13a1Q9R1N9 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col13a1Q9R1N9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col13a1Q9R1N9 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm22590-201ENSMUST00000104247 128 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm24788-201ENSMUST00000104283 156 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm13329-201ENSMUST00000117063 265 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm8666-201ENSMUST00000117517 292 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm14774-201ENSMUST00000117857 536 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm14119-201ENSMUST00000119511 235 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm15029-201ENSMUST00000119742 199 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm25220-201ENSMUST00000157546 95 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm26414-201ENSMUST00000157674 269 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm24739-201ENSMUST00000158855 292 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm17187-201ENSMUST00000164622 410 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm27796-201ENSMUST00000183863 261 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm27733-201ENSMUST00000184803 68 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm45031-201ENSMUST00000206800 288 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm6240-201ENSMUST00000208014 473 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col13a1Q9R1N9 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm13386-201ENSMUST00000117677 124 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm15313-201ENSMUST00000119179 282 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm13967-201ENSMUST00000120404 380 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm13692-201ENSMUST00000120774 371 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm23184-201ENSMUST00000122594 131 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm23956-201ENSMUST00000157211 119 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm22389-201ENSMUST00000158193 301 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm3370-201ENSMUST00000171785 500 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm22108-201ENSMUST00000177961 106 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm23215-201ENSMUST00000178153 121 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm24798-201ENSMUST00000179334 106 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm27535-201ENSMUST00000183814 157 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Mir6996-201ENSMUST00000183922 61 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm10088-201ENSMUST00000074116 423 ntBASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col13a1Q9R1N9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm37239-201ENSMUST00000193510 141 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm38060-201ENSMUST00000194822 464 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 LOC667541-201ENSMUST00000223408 278 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm25698-201ENSMUST00000082897 107 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm26497-201ENSMUST00000083146 107 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm8074-201ENSMUST00000095071 252 ntBASIC3.48□□□□□ -1.85
Col13a1Q9R1N9 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms