Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Upk3aQ9JKX8 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.26□□□□□ -2.05
Upk3aQ9JKX8 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm23472-201ENSMUST00000101806 191 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm12006-201ENSMUST00000120786 403 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm16561-201ENSMUST00000163001 192 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm24497-201ENSMUST00000177868 191 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm25939-201ENSMUST00000179876 191 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm28283-201ENSMUST00000185509 178 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm19694-201ENSMUST00000192364 505 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm43284-201ENSMUST00000200103 253 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm45658-201ENSMUST00000209197 580 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm22806-201ENSMUST00000082738 136 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm23444-201ENSMUST00000082922 191 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Gm25411-201ENSMUST00000083760 151 ntBASIC2.25□□□□□ -2.05
Upk3aQ9JKX8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm12598-201ENSMUST00000117333 830 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm15106-201ENSMUST00000119691 821 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm24911-201ENSMUST00000157292 136 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm24546-201ENSMUST00000158652 102 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm17377-201ENSMUST00000165184 207 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm23269-201ENSMUST00000178701 107 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm36984-201ENSMUST00000192770 235 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Snord7-201ENSMUST00000083781 97 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm24490-201ENSMUST00000083803 98 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Mir127-201ENSMUST00000093568 70 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Upk3aQ9JKX8 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm23744-201ENSMUST00000104231 149 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm25529-201ENSMUST00000104850 92 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm13343-201ENSMUST00000116474 105 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm13356-201ENSMUST00000121678 335 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm25102-201ENSMUST00000122479 112 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm26424-201ENSMUST00000122530 104 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm25706-201ENSMUST00000157828 247 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm23933-201ENSMUST00000178405 79 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm24713-201ENSMUST00000178850 107 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm25448-201ENSMUST00000180065 107 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm27220-201ENSMUST00000183453 262 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm27369-201ENSMUST00000185182 71 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm43722-201ENSMUST00000196054 124 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm35212-201ENSMUST00000196672 606 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Mir6925-201ENSMUST00000197857 70 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm44324-201ENSMUST00000198517 135 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm44609-201ENSMUST00000207157 460 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm45387-201ENSMUST00000209792 632 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 Gm6796-201ENSMUST00000211919 243 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.23□□□□□ -2.05
Upk3aQ9JKX8 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm22091-201ENSMUST00000116908 127 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm6954-201ENSMUST00000117416 225 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm11352-201ENSMUST00000119264 517 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm14593-201ENSMUST00000119948 294 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm22517-201ENSMUST00000158265 136 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm23025-201ENSMUST00000158769 111 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm23005-201ENSMUST00000158950 136 ntBASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Upk3aQ9JKX8 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms