Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Mir27b-201ENSMUST00000083541 73 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm23435-201ENSMUST00000157183 156 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm22559-201ENSMUST00000157329 134 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 AL662807.1-201ENSMUST00000224183 126 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Mir129-2-201ENSMUST00000083577 90 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm15110-201ENSMUST00000117545 881 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm15113-201ENSMUST00000119280 836 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm15112-201ENSMUST00000120152 860 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm23783-201ENSMUST00000157941 102 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm25166-201ENSMUST00000158909 111 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm5224-201ENSMUST00000183060 350 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm28453-203ENSMUST00000187041 189 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Gm43865-201ENSMUST00000204721 127 ntBASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Cpsf1Q9EPU4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Cpsf1Q9EPU4 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.3□□□□□ -2.2
Cpsf1Q9EPU4 Gm8207-201ENSMUST00000171204 502 ntBASIC1.3□□□□□ -2.2
Cpsf1Q9EPU4 Gm21147-201ENSMUST00000186046 913 ntBASIC1.3□□□□□ -2.2
Cpsf1Q9EPU4 Gm44446-201ENSMUST00000204864 255 ntBASIC1.3□□□□□ -2.2
Cpsf1Q9EPU4 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Cpsf1Q9EPU4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Cpsf1Q9EPU4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
Cpsf1Q9EPU4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Cpsf1Q9EPU4 Gm22945-201ENSMUST00000158557 157 ntBASIC1.29□□□□□ -2.2
Cpsf1Q9EPU4 Snora24-201ENSMUST00000174989 130 ntBASIC1.29□□□□□ -2.2
Cpsf1Q9EPU4 Gm42438-201ENSMUST00000197832 974 ntBASIC1.29□□□□□ -2.2
Cpsf1Q9EPU4 Gm44058-201ENSMUST00000204335 467 ntBASIC1.29□□□□□ -2.2
Cpsf1Q9EPU4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Cpsf1Q9EPU4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.28□□□□□ -2.2
Cpsf1Q9EPU4 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.28□□□□□ -2.2
Cpsf1Q9EPU4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.28□□□□□ -2.2
Cpsf1Q9EPU4 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.28□□□□□ -2.2
Cpsf1Q9EPU4 Mir219b-201ENSMUST00000198317 65 ntBASIC1.28□□□□□ -2.2
Cpsf1Q9EPU4 Gm44656-201ENSMUST00000208428 490 ntBASIC1.28□□□□□ -2.2
Cpsf1Q9EPU4 Gm6923-201ENSMUST00000118343 406 ntBASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 Gm25161-201ENSMUST00000158913 132 ntBASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 Gm22646-201ENSMUST00000175130 115 ntBASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.27□□□□□ -2.21
Cpsf1Q9EPU4 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
Cpsf1Q9EPU4 Snord65-201ENSMUST00000104269 72 ntBASIC1.26□□□□□ -2.21
Cpsf1Q9EPU4 Gm25901-201ENSMUST00000158494 130 ntBASIC1.26□□□□□ -2.21
Cpsf1Q9EPU4 Gm18775-201ENSMUST00000190763 586 ntBASIC1.26□□□□□ -2.21
Cpsf1Q9EPU4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cpsf1Q9EPU4 Snora3-201ENSMUST00000083082 132 ntBASIC1.26□□□□□ -2.21
Cpsf1Q9EPU4 Gm11898-201ENSMUST00000117161 385 ntBASIC1.25□□□□□ -2.21
Cpsf1Q9EPU4 Gm13876-201ENSMUST00000118451 261 ntBASIC1.25□□□□□ -2.21
Cpsf1Q9EPU4 Gm18964-201ENSMUST00000193013 563 ntBASIC1.25□□□□□ -2.21
Cpsf1Q9EPU4 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.25□□□□□ -2.21
Cpsf1Q9EPU4 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.25□□□□□ -2.21
Cpsf1Q9EPU4 Gm11693-201ENSMUST00000119625 565 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Mup-ps21-201ENSMUST00000119998 448 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm7846-201ENSMUST00000145844 274 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm23617-201ENSMUST00000175410 95 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm21139-201ENSMUST00000186594 877 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm43979-201ENSMUST00000203179 475 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm43978-201ENSMUST00000203491 451 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm45288-201ENSMUST00000210236 151 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm19118-201ENSMUST00000222554 98 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Olfr197-201ENSMUST00000080031 926 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm25856-201ENSMUST00000082786 75 ntBASIC1.24□□□□□ -2.21
Cpsf1Q9EPU4 Gm27587-201ENSMUST00000185116 163 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm46994-201ENSMUST00000221523 219 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm25079-201ENSMUST00000082529 203 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm22390-201ENSMUST00000157588 325 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm17038-201ENSMUST00000166586 494 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Mir6402-201ENSMUST00000183406 80 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Mir7091-201ENSMUST00000184075 79 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm29263-201ENSMUST00000188718 463 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm28384-201ENSMUST00000189079 463 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.23□□□□□ -2.21
Cpsf1Q9EPU4 Gm14879-201ENSMUST00000117308 507 ntBASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 Gm16129-201ENSMUST00000152628 486 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms