Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm25930-201ENSMUST00000082785 107 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm23517-201ENSMUST00000082830 192 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm23510-201ENSMUST00000083083 163 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim42Q9D2H5 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Trim42Q9D2H5 Mir92b-201ENSMUST00000102300 83 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm13504-201ENSMUST00000117490 316 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm12808-201ENSMUST00000120597 404 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Mir1967-201ENSMUST00000157789 82 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm26045-201ENSMUST00000157862 97 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm17186-201ENSMUST00000171742 456 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm17166-201ENSMUST00000172006 431 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm20428-201ENSMUST00000174365 283 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Mir5129-201ENSMUST00000174938 78 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm27477-201ENSMUST00000184649 143 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm36964-201ENSMUST00000191876 198 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm18956-201ENSMUST00000192857 480 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Mir721-201ENSMUST00000200230 88 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm23039-201ENSMUST00000083870 161 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim42Q9D2H5 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm25421-201ENSMUST00000104218 164 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm11432-201ENSMUST00000117334 231 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm13737-201ENSMUST00000119793 232 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm11718-201ENSMUST00000119942 537 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm23534-201ENSMUST00000157539 97 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm22217-201ENSMUST00000157556 313 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm7582-201ENSMUST00000160831 603 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm27535-201ENSMUST00000183814 157 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm7182-201ENSMUST00000193351 732 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim42Q9D2H5 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm25537-201ENSMUST00000103851 109 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm14894-201ENSMUST00000117170 270 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm13210-201ENSMUST00000121483 273 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm14500-201ENSMUST00000121647 113 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm15065-201ENSMUST00000121699 273 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm13419-201ENSMUST00000121711 271 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm23184-201ENSMUST00000122594 131 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm25115-201ENSMUST00000157187 140 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm26195-201ENSMUST00000175035 101 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm37449-201ENSMUST00000193016 270 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm18658-201ENSMUST00000195558 270 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm43704-201ENSMUST00000196164 496 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm43309-201ENSMUST00000200837 458 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.38□□□□□ -1.71
Trim42Q9D2H5 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim42Q9D2H5 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.37□□□□□ -1.71
Trim42Q9D2H5 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Trim42Q9D2H5 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim42Q9D2H5 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.37□□□□□ -1.71
Trim42Q9D2H5 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.37□□□□□ -1.71
Trim42Q9D2H5 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms