Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm44391-201ENSMUST00000198490 93 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm44881-201ENSMUST00000205425 367 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm2446-201ENSMUST00000220144 772 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm25402-201ENSMUST00000082966 131 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm23104-201ENSMUST00000083722 104 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm25313-201ENSMUST00000101817 116 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm23109-201ENSMUST00000116867 126 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm6923-201ENSMUST00000118343 406 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm26256-201ENSMUST00000122499 186 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm25113-201ENSMUST00000157185 143 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm25621-201ENSMUST00000157223 114 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm23287-201ENSMUST00000179427 116 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm23143-201ENSMUST00000180137 116 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm29460-201ENSMUST00000188607 714 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm19649-201ENSMUST00000201126 822 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm22683-201ENSMUST00000082854 137 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm24948-201ENSMUST00000082866 207 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm24871-201ENSMUST00000083099 116 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm25411-201ENSMUST00000083760 151 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Rnu5g-201ENSMUST00000093721 116 ntBASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Rpa3Q9CQ71 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm14670-201ENSMUST00000117327 337 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm5646-201ENSMUST00000120568 714 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm24908-201ENSMUST00000157294 127 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm22803-201ENSMUST00000158049 283 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm22764-201ENSMUST00000158370 92 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm23727-201ENSMUST00000083352 164 ntBASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Rpa3Q9CQ71 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm14943-201ENSMUST00000118056 546 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm12926-201ENSMUST00000121158 409 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Mir669n-201ENSMUST00000158636 54 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm25368-201ENSMUST00000158847 131 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm43171-201ENSMUST00000199882 291 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm43979-201ENSMUST00000203179 475 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm24622-201ENSMUST00000082619 162 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm22005-201ENSMUST00000082795 141 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Mir421-201ENSMUST00000083575 76 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.85□□□□□ -2.11
Rpa3Q9CQ71 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm23950-201ENSMUST00000104026 129 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm14657-201ENSMUST00000117461 302 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm22037-201ENSMUST00000157280 296 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm22664-201ENSMUST00000158719 105 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm18397-201ENSMUST00000176704 587 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm26189-201ENSMUST00000179879 107 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm25820-202ENSMUST00000197479 128 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm43978-201ENSMUST00000203491 451 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Gm44656-201ENSMUST00000208428 490 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.84□□□□□ -2.11
Rpa3Q9CQ71 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Rpa3Q9CQ71 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Rpa3Q9CQ71 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Rpa3Q9CQ71 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Mir758-201ENSMUST00000103260 81 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm25485-201ENSMUST00000104120 132 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm13331-201ENSMUST00000117500 448 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm13603-201ENSMUST00000119404 83 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm14238-201ENSMUST00000120227 323 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm25961-201ENSMUST00000157174 135 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm23043-201ENSMUST00000157890 109 ntBASIC1.83□□□□□ -2.12
Rpa3Q9CQ71 Gm27991-201ENSMUST00000184804 137 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms