Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.21□□□□□ -1.9
Msh4Q99MT2 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm22115-201ENSMUST00000103976 133 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm23923-201ENSMUST00000104108 133 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm14629-201ENSMUST00000122428 144 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm26275-201ENSMUST00000157101 268 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm22891-201ENSMUST00000158641 164 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm23024-201ENSMUST00000158770 292 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm20656-201ENSMUST00000176925 518 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm27624-201ENSMUST00000185047 177 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm7871-201ENSMUST00000195346 618 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm42925-201ENSMUST00000197359 285 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm44870-201ENSMUST00000207291 357 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm7422-201ENSMUST00000220115 640 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm22739-201ENSMUST00000083437 160 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Gm23096-201ENSMUST00000083447 107 ntBASIC3.2□□□□□ -1.9
Msh4Q99MT2 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Msh4Q99MT2 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Mir673-201ENSMUST00000102361 91 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm25728-201ENSMUST00000104525 159 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm23609-201ENSMUST00000104542 127 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm12782-201ENSMUST00000117519 727 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm14593-201ENSMUST00000119948 294 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm23886-201ENSMUST00000122684 313 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm24857-201ENSMUST00000158061 310 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm17919-201ENSMUST00000173344 312 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Mir6413-201ENSMUST00000184049 108 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Mir6371-201ENSMUST00000184470 111 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm28069-201ENSMUST00000189926 214 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm43704-201ENSMUST00000196164 496 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm43284-201ENSMUST00000200103 253 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.19□□□□□ -1.9
Msh4Q99MT2 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Msh4Q99MT2 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Mir743b-201ENSMUST00000104751 77 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm12765-201ENSMUST00000117273 615 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm14670-201ENSMUST00000117327 337 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm15733-201ENSMUST00000132957 242 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm24577-201ENSMUST00000158580 63 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm24819-201ENSMUST00000175094 166 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Mir5099-201ENSMUST00000175257 74 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm26180-201ENSMUST00000179942 107 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Mir6951-201ENSMUST00000183910 75 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm28314-201ENSMUST00000191276 345 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm8242-202ENSMUST00000193056 475 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm36776-201ENSMUST00000207006 203 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm44909-201ENSMUST00000208756 165 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm45730-201ENSMUST00000212560 395 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Mir10a-201ENSMUST00000083585 110 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.18□□□□□ -1.9
Msh4Q99MT2 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Msh4Q99MT2 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Msh4Q99MT2 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Msh4Q99MT2 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 136.4 ms