Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13210-201ENSMUST00000121483 273 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm15065-201ENSMUST00000121699 273 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm15986-201ENSMUST00000122153 400 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm14473-201ENSMUST00000122269 557 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm16545-201ENSMUST00000161968 463 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm20542-201ENSMUST00000174582 372 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm23053-201ENSMUST00000175136 96 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm24799-201ENSMUST00000178431 79 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm37449-201ENSMUST00000193016 270 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm18658-201ENSMUST00000195558 270 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm44337-201ENSMUST00000196553 114 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Clp1Q99LI9 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Clp1Q99LI9 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.5□□□□□ -1.69
Clp1Q99LI9 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.5□□□□□ -1.69
Clp1Q99LI9 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Clp1Q99LI9 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Clp1Q99LI9 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Clp1Q99LI9 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Clp1Q99LI9 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Clp1Q99LI9 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm24423-201ENSMUST00000101982 106 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm23705-201ENSMUST00000104370 130 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm13541-201ENSMUST00000119519 283 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm22118-201ENSMUST00000175593 171 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm27457-201ENSMUST00000184771 156 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm19244-201ENSMUST00000204340 253 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm22062-201ENSMUST00000082563 107 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm22620-201ENSMUST00000082700 133 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Clp1Q99LI9 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.49□□□□□ -1.69
Clp1Q99LI9 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clp1Q99LI9 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm23836-201ENSMUST00000104434 129 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm23226-201ENSMUST00000116927 103 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm15553-201ENSMUST00000118757 430 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm23713-201ENSMUST00000157353 70 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm22601-201ENSMUST00000157595 250 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm23585-201ENSMUST00000157656 102 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm22615-201ENSMUST00000158102 70 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm29484-201ENSMUST00000186067 324 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm37791-201ENSMUST00000195081 286 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Gm34779-201ENSMUST00000210036 263 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Clp1Q99LI9 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Neat1-201ENSMUST00000173672 20771 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.48□□□□□ -1.69
Clp1Q99LI9 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Clp1Q99LI9 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm13321-201ENSMUST00000117101 400 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm12793-201ENSMUST00000119268 292 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm12335-201ENSMUST00000119738 327 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm14846-201ENSMUST00000121868 216 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm22958-201ENSMUST00000122512 184 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm23892-201ENSMUST00000158105 130 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm22156-201ENSMUST00000158409 141 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm26171-201ENSMUST00000158422 131 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm23112-201ENSMUST00000158606 125 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Mir6371-201ENSMUST00000184470 111 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm27421-201ENSMUST00000184729 167 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms