Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.88□□□□□ -2.11
Lsm1Q8VC85 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.88□□□□□ -2.11
Lsm1Q8VC85 Gm25376-201ENSMUST00000104340 133 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm12871-201ENSMUST00000118758 438 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm23885-201ENSMUST00000122682 294 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm22452-201ENSMUST00000122804 104 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm25220-201ENSMUST00000157546 95 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm22382-201ENSMUST00000158185 130 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm5329-201ENSMUST00000186898 463 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm37568-201ENSMUST00000191755 364 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm37743-201ENSMUST00000194645 376 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm43402-201ENSMUST00000197159 159 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm43228-201ENSMUST00000200735 264 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm29754-201ENSMUST00000206269 358 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm45013-201ENSMUST00000206883 178 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm45754-201ENSMUST00000212380 279 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm25755-201ENSMUST00000083396 107 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.87□□□□□ -2.11
Lsm1Q8VC85 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm14932-201ENSMUST00000117112 453 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm16328-201ENSMUST00000126985 196 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm25624-201ENSMUST00000157222 275 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Mir3092-201ENSMUST00000174954 96 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm24264-201ENSMUST00000179835 94 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm27991-201ENSMUST00000184804 137 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm27544-201ENSMUST00000185069 155 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm43955-201ENSMUST00000204332 142 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm45386-201ENSMUST00000210194 218 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm25130-201ENSMUST00000082650 156 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Mir222-201ENSMUST00000083537 79 ntBASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Lsm1Q8VC85 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm15215-201ENSMUST00000117773 489 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm11438-201ENSMUST00000121582 189 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm17161-201ENSMUST00000169187 524 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm5900-201ENSMUST00000179862 375 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm18991-201ENSMUST00000209225 746 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm25124-201ENSMUST00000083345 164 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Mir421-201ENSMUST00000083575 76 ntBASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Lsm1Q8VC85 Gm24068-201ENSMUST00000104513 132 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Mir344e-201ENSMUST00000104677 66 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm13482-201ENSMUST00000119842 254 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm14629-201ENSMUST00000122428 144 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm23754-201ENSMUST00000157576 63 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm24878-201ENSMUST00000158782 104 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm8207-201ENSMUST00000171204 502 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm24080-201ENSMUST00000175178 232 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm21726-201ENSMUST00000179654 392 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm27722-201ENSMUST00000183908 76 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Mir6950-201ENSMUST00000184438 73 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Mir6901-201ENSMUST00000185062 62 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm44212-201ENSMUST00000205016 897 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm20304-201ENSMUST00000218168 444 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm22061-201ENSMUST00000082557 107 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Mir300-201ENSMUST00000083485 79 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm23104-201ENSMUST00000083722 104 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm23040-201ENSMUST00000083869 163 ntBASIC1.84□□□□□ -2.11
Lsm1Q8VC85 Gm25313-201ENSMUST00000101817 116 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm25090-201ENSMUST00000104000 132 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Anp32-ps-201ENSMUST00000118265 388 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm15312-201ENSMUST00000118827 271 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm5646-201ENSMUST00000120568 714 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm13555-201ENSMUST00000121668 319 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm23287-201ENSMUST00000179427 116 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm23143-201ENSMUST00000180137 116 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm44487-201ENSMUST00000205145 325 ntBASIC1.83□□□□□ -2.12
Lsm1Q8VC85 Gm18252-203ENSMUST00000215855 757 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms