Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm6012-201ENSMUST00000210821 730 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Snord38a-201ENSMUST00000083746 71 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm24338-201ENSMUST00000104205 127 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm22021-201ENSMUST00000104353 107 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm26145-201ENSMUST00000104476 127 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Snord72-201ENSMUST00000104549 81 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm14815-201ENSMUST00000120060 488 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm23213-201ENSMUST00000122715 313 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm25334-201ENSMUST00000158036 110 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm23016-201ENSMUST00000158431 62 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm25671-201ENSMUST00000178612 105 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm22851-201ENSMUST00000178741 94 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm23307-201ENSMUST00000179167 105 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm25286-201ENSMUST00000179790 105 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm27385-201ENSMUST00000184747 104 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm27608-201ENSMUST00000184822 162 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm45590-201ENSMUST00000209715 262 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm31849-201ENSMUST00000220306 375 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm4017-201ENSMUST00000084813 338 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc9Q8VC31 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Mir690-201ENSMUST00000102110 109 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm7429-201ENSMUST00000118664 348 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm6071-201ENSMUST00000119561 440 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm15106-201ENSMUST00000119691 821 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm14736-201ENSMUST00000121470 336 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm12693-201ENSMUST00000121965 483 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm6265-201ENSMUST00000149263 231 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm24499-201ENSMUST00000158446 104 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm27161-201ENSMUST00000183960 562 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm44125-201ENSMUST00000203068 448 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm45049-201ENSMUST00000207586 591 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm22572-201ENSMUST00000082985 105 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc9Q8VC31 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm25088-201ENSMUST00000101803 79 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm12235-201ENSMUST00000118596 170 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm12042-201ENSMUST00000120479 301 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm16533-201ENSMUST00000140035 228 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm22792-201ENSMUST00000157225 133 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm24213-201ENSMUST00000158255 258 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm22085-201ENSMUST00000158344 110 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm22136-201ENSMUST00000158751 268 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm3470-201ENSMUST00000160819 420 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm17065-201ENSMUST00000165245 239 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm8207-201ENSMUST00000171204 502 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm20399-201ENSMUST00000174652 132 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm23144-201ENSMUST00000180226 107 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm28098-201ENSMUST00000191361 699 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm36984-201ENSMUST00000192770 235 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm43142-201ENSMUST00000198670 361 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm2446-201ENSMUST00000220144 772 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Snord42a-201ENSMUST00000082606 65 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.78□□□□□ -1.8
Ccdc9Q8VC31 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.77□□□□□ -1.81
Ccdc9Q8VC31 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Ccdc9Q8VC31 Gm25213-201ENSMUST00000102388 113 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms