Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm23679-201ENSMUST00000083161 119 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm23422-201ENSMUST00000102000 107 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm13873-201ENSMUST00000119208 427 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm11862-201ENSMUST00000119678 659 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm12924-201ENSMUST00000121747 318 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm24627-201ENSMUST00000122764 138 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm22038-201ENSMUST00000157277 242 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm24409-201ENSMUST00000157881 152 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm3027-201ENSMUST00000167579 451 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm3104-201ENSMUST00000171004 473 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm8207-201ENSMUST00000171204 502 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm20542-201ENSMUST00000174582 372 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Mir8106-201ENSMUST00000184520 139 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm20923-201ENSMUST00000190009 319 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm21088-201ENSMUST00000190875 316 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm45860-201ENSMUST00000212700 334 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm9818-201ENSMUST00000050900 255 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm24533-201ENSMUST00000083138 196 ntBASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ushbp1Q8R370 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm23609-201ENSMUST00000104542 127 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Mir743b-201ENSMUST00000104751 77 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm25325-201ENSMUST00000122559 86 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm25902-201ENSMUST00000158493 318 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm22891-201ENSMUST00000158641 164 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm7953-201ENSMUST00000168278 469 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21842-201ENSMUST00000177552 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21626-201ENSMUST00000177791 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21562-201ENSMUST00000177888 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21539-201ENSMUST00000177925 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21599-201ENSMUST00000178249 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21914-201ENSMUST00000178452 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21723-201ENSMUST00000178692 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21916-201ENSMUST00000178771 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21801-201ENSMUST00000178865 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21633-201ENSMUST00000178941 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21821-201ENSMUST00000179646 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21588-201ENSMUST00000180074 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21780-201ENSMUST00000180128 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21572-201ENSMUST00000180134 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm21529-201ENSMUST00000180175 498 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm28148-201ENSMUST00000186924 697 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm29370-202ENSMUST00000187476 499 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm44063-201ENSMUST00000203307 376 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm9712-201ENSMUST00000210842 311 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ushbp1Q8R370 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.94□□□□□ -1.78
Ushbp1Q8R370 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm25407-201ENSMUST00000104102 134 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm22496-201ENSMUST00000104493 88 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm23532-201ENSMUST00000104569 112 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm15106-201ENSMUST00000119691 821 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm8840-201ENSMUST00000122454 386 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm26101-201ENSMUST00000157246 105 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm22675-201ENSMUST00000158430 104 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm25175-201ENSMUST00000178712 79 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm27608-201ENSMUST00000184822 162 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm6059-201ENSMUST00000196903 340 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm23406-201ENSMUST00000082537 122 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm25937-201ENSMUST00000083912 107 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ushbp1Q8R370 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms