Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm27374-201ENSMUST00000183660 81 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Mir6413-201ENSMUST00000184049 108 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm43932-201ENSMUST00000204499 52 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm6012-201ENSMUST00000210821 730 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm46193-201ENSMUST00000219399 364 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm5175-202ENSMUST00000219699 529 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm19326-201ENSMUST00000219818 326 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm22577-201ENSMUST00000083731 109 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Mir452-201ENSMUST00000093629 85 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps53Q8CCB4 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm14657-201ENSMUST00000117461 302 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm23791-201ENSMUST00000122553 293 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm26088-201ENSMUST00000157896 131 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm24499-201ENSMUST00000158446 104 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm23725-201ENSMUST00000177876 107 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm25284-201ENSMUST00000180345 141 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Mir6914-201ENSMUST00000184999 69 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm19498-201ENSMUST00000191128 331 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm37081-201ENSMUST00000192034 196 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Mir6375-201ENSMUST00000197176 95 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.85□□□□□ -1.79
Vps53Q8CCB4 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm25929-201ENSMUST00000082784 107 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Vps53Q8CCB4 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.85□□□□□ -1.79
Vps53Q8CCB4 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm25308-201ENSMUST00000104171 158 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm26156-201ENSMUST00000116999 123 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm14761-201ENSMUST00000121363 262 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm6762-201ENSMUST00000121769 289 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm14578-201ENSMUST00000122166 391 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm26027-201ENSMUST00000122725 268 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm24409-201ENSMUST00000157881 152 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm23852-201ENSMUST00000158376 77 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm26622-201ENSMUST00000180520 298 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Mir7081-201ENSMUST00000184490 75 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm28408-201ENSMUST00000191557 463 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm32340-201ENSMUST00000192883 259 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm8242-202ENSMUST00000193056 475 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm44161-201ENSMUST00000203532 253 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm44472-201ENSMUST00000204922 943 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Gm45730-201ENSMUST00000212560 395 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Vps53Q8CCB4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Vps53Q8CCB4 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26504-201ENSMUST00000102033 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm14821-201ENSMUST00000121975 435 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26278-201ENSMUST00000157098 132 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26100-201ENSMUST00000157245 127 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm24819-201ENSMUST00000175094 166 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22258-201ENSMUST00000177645 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26502-201ENSMUST00000177732 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm25350-201ENSMUST00000177849 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm23446-201ENSMUST00000177977 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26201-201ENSMUST00000178047 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm24711-201ENSMUST00000178062 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm24609-201ENSMUST00000178166 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm23265-201ENSMUST00000178321 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22812-201ENSMUST00000178329 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26246-201ENSMUST00000178388 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22131-201ENSMUST00000178415 94 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms