Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm45365-201ENSMUST00000209489 256 ntBASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Gm14791-201ENSMUST00000119061 1166 ntBASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Gm5709-201ENSMUST00000177879 1165 ntBASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Npn2-202ENSMUST00000189275 235 ntBASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Gm31230-201ENSMUST00000199725 785 ntBASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Gm45316-201ENSMUST00000210128 162 ntBASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Gm26493-201ENSMUST00000083155 136 ntBASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Col6a6Q8C6K9 Gm14049-201ENSMUST00000121009 636 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm22208-201ENSMUST00000122658 110 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm23633-201ENSMUST00000175293 119 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm22583-201ENSMUST00000178031 107 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Mir6381-201ENSMUST00000183426 87 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm27999-201ENSMUST00000183539 193 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm22980-201ENSMUST00000082608 70 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm25497-201ENSMUST00000104425 132 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm22151-201ENSMUST00000116963 58 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm28191-201ENSMUST00000189112 211 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm37979-201ENSMUST00000193065 712 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Gm45754-201ENSMUST00000212380 279 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 AC157772.2-201ENSMUST00000228202 259 ntBASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Col6a6Q8C6K9 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Gm25495-201ENSMUST00000104431 131 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Mup-ps1-201ENSMUST00000120720 544 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Gm26089-201ENSMUST00000157898 107 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Gm44332-201ENSMUST00000203712 433 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Gm45268-201ENSMUST00000210046 370 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Gm23517-201ENSMUST00000082830 192 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Mir141-201ENSMUST00000083540 72 ntBASIC0.9□□□□□ -2.26
Col6a6Q8C6K9 Gm42701-201ENSMUST00000196117 1657 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Gm17113-201ENSMUST00000170118 171 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Gm23151-201ENSMUST00000178061 107 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Gm27869-201ENSMUST00000184327 122 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Gm37219-201ENSMUST00000192036 926 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Gm6109-201ENSMUST00000223297 348 ntBASIC0.9□□□□□ -2.27
Col6a6Q8C6K9 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Mir873a-201ENSMUST00000104863 77 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm13577-201ENSMUST00000121365 205 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm22485-201ENSMUST00000157990 109 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm26355-201ENSMUST00000158220 105 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm27607-201ENSMUST00000185162 122 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 CT010455.1-201ENSMUST00000218579 413 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm14577-201ENSMUST00000121134 256 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm23167-201ENSMUST00000157155 103 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm17935-201ENSMUST00000196649 772 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm44274-201ENSMUST00000203417 256 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Gm45288-201ENSMUST00000210236 151 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 AC134254.5-201ENSMUST00000223436 400 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Col6a6Q8C6K9 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Col6a6Q8C6K9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Col6a6Q8C6K9 Gm25107-201ENSMUST00000122472 129 ntBASIC0.88□□□□□ -2.27
Col6a6Q8C6K9 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms