Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm24049-201ENSMUST00000102409 100 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Mir758-201ENSMUST00000103260 81 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm14709-201ENSMUST00000121225 304 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm25113-201ENSMUST00000157185 143 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm16584-201ENSMUST00000159267 189 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm27991-201ENSMUST00000184804 137 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm27964-201ENSMUST00000185195 62 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm44137-201ENSMUST00000203670 367 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm44041-201ENSMUST00000203678 396 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.75□□□□□ -2.13
Trub1Q8C0D0 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm24948-201ENSMUST00000082866 207 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm26055-201ENSMUST00000083038 107 ntBASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trub1Q8C0D0 Gm13603-201ENSMUST00000119404 83 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm5646-201ENSMUST00000120568 714 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm23043-201ENSMUST00000157890 109 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm25368-201ENSMUST00000158847 131 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm27761-201ENSMUST00000184091 131 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm45150-201ENSMUST00000206051 467 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm2676-201ENSMUST00000207279 606 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm45439-201ENSMUST00000211723 359 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Mir93-201ENSMUST00000083593 88 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm23102-201ENSMUST00000083724 116 ntBASIC1.74□□□□□ -2.13
Trub1Q8C0D0 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trub1Q8C0D0 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm23950-201ENSMUST00000104026 129 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm22270-201ENSMUST00000104034 132 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm13343-201ENSMUST00000116474 105 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm14670-201ENSMUST00000117327 337 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm15029-201ENSMUST00000119742 199 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm13194-201ENSMUST00000142299 311 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm19649-201ENSMUST00000201126 822 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm31520-201ENSMUST00000203048 733 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm2446-201ENSMUST00000220144 772 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.73□□□□□ -2.13
Trub1Q8C0D0 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm16355-201ENSMUST00000128606 231 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm24911-201ENSMUST00000157292 136 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm23137-201ENSMUST00000157559 107 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm25334-201ENSMUST00000158036 110 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm22803-201ENSMUST00000158049 283 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm24304-201ENSMUST00000177635 107 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm20058-201ENSMUST00000186939 284 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Gm44472-201ENSMUST00000204922 943 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Trub1Q8C0D0 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.72□□□□□ -2.13
Trub1Q8C0D0 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Trub1Q8C0D0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm26396-201ENSMUST00000104093 132 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm14943-201ENSMUST00000118056 546 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm6923-201ENSMUST00000118343 406 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm8217-201ENSMUST00000119136 465 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.71□□□□□ -2.14
Trub1Q8C0D0 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm15692-201ENSMUST00000152173 352 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm23754-201ENSMUST00000157576 63 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm17061-201ENSMUST00000163167 499 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm9071-201ENSMUST00000165915 474 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm17038-201ENSMUST00000166586 494 ntBASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Trub1Q8C0D0 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 128.2 ms