Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm23370-202ENSMUST00000197008 129 ntBASIC5.62□□□□□ -1.51
Trim35Q8C006 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Mir219c-201ENSMUST00000199860 60 ntBASIC5.62□□□□□ -1.51
Trim35Q8C006 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 CT030687.1-201ENSMUST00000221854 162 ntBASIC5.62□□□□□ -1.51
Trim35Q8C006 Gm25588-201ENSMUST00000082501 140 ntBASIC5.62□□□□□ -1.51
Trim35Q8C006 Gm24524-201ENSMUST00000082925 170 ntBASIC5.62□□□□□ -1.51
Trim35Q8C006 Mir9-2-201ENSMUST00000083490 72 ntBASIC5.62□□□□□ -1.51
Trim35Q8C006 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Gm10242-201ENSMUST00000090064 330 ntBASIC5.62□□□□□ -1.51
Trim35Q8C006 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim35Q8C006 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim35Q8C006 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim35Q8C006 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim35Q8C006 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim35Q8C006 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim35Q8C006 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Gm15365-201ENSMUST00000122392 300 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Gm25711-201ENSMUST00000158633 128 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim35Q8C006 Mir6383-201ENSMUST00000184545 116 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Gm44666-201ENSMUST00000208544 391 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 AC132833.2-201ENSMUST00000228699 157 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Trim35Q8C006 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim35Q8C006 Gm37063-201ENSMUST00000194678 3520 ntBASIC5.61□□□□□ -1.51
Trim35Q8C006 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim35Q8C006 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim35Q8C006 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Trim35Q8C006 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim35Q8C006 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim35Q8C006 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim35Q8C006 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Gm13831-201ENSMUST00000118764 302 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Gm14267-201ENSMUST00000119751 496 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Gm22959-201ENSMUST00000122514 303 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.6□□□□□ -1.51
Trim35Q8C006 Gm44964-201ENSMUST00000207011 273 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Gm8274-201ENSMUST00000219820 463 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 AC123709.1-201ENSMUST00000224848 345 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Trim35Q8C006 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim35Q8C006 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim35Q8C006 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim35Q8C006 AC154515.1-201ENSMUST00000226085 2841 ntBASIC5.6□□□□□ -1.51
Trim35Q8C006 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim35Q8C006 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim35Q8C006 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim35Q8C006 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim35Q8C006 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim35Q8C006 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim35Q8C006 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim35Q8C006 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm25782-201ENSMUST00000122526 289 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm20613-201ENSMUST00000175828 345 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Mir7653-201ENSMUST00000184358 61 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm37070-201ENSMUST00000193272 460 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim35Q8C006 Trbv7-201ENSMUST00000193339 402 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm2011-203ENSMUST00000203750 435 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim35Q8C006 AC153887.2-201ENSMUST00000219160 3838 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm11351-202ENSMUST00000225724 478 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.59□□□□□ -1.51
Trim35Q8C006 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim35Q8C006 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Trim35Q8C006 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.59□□□□□ -1.52
Trim35Q8C006 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.52
Trim35Q8C006 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim35Q8C006 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim35Q8C006 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim35Q8C006 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms