Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm11438-201ENSMUST00000121582 189 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm12071-201ENSMUST00000121968 469 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm24627-201ENSMUST00000122764 138 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm22538-201ENSMUST00000158169 299 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm22527-201ENSMUST00000158816 106 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm17085-201ENSMUST00000165425 502 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Mir7k-201ENSMUST00000184115 110 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm28283-201ENSMUST00000185509 178 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm5329-201ENSMUST00000186898 463 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm42739-201ENSMUST00000200687 226 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm45590-201ENSMUST00000209715 262 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm45382-201ENSMUST00000210607 151 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.58□□□□□ -2
Ccdc40Q8BI79 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ccdc40Q8BI79 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.58□□□□□ -2
Ccdc40Q8BI79 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ccdc40Q8BI79 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc40Q8BI79 Olfr197-201ENSMUST00000080031 926 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm22578-201ENSMUST00000083730 107 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm22866-201ENSMUST00000083947 177 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ccdc40Q8BI79 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm26154-201ENSMUST00000102339 96 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm12372-201ENSMUST00000121654 768 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm25153-201ENSMUST00000157118 156 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm23600-201ENSMUST00000157260 71 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm22554-201ENSMUST00000157798 147 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm22382-201ENSMUST00000158185 130 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm24878-201ENSMUST00000158782 104 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm16588-201ENSMUST00000162889 355 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm38311-201ENSMUST00000192945 165 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm44393-201ENSMUST00000197418 138 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc40Q8BI79 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc40Q8BI79 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm10298-201ENSMUST00000074801 265 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.57□□□□□ -2
Ccdc40Q8BI79 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc40Q8BI79 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ccdc40Q8BI79 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ccdc40Q8BI79 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm22936-201ENSMUST00000103955 126 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm24430-201ENSMUST00000104077 104 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm11357-201ENSMUST00000119758 954 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm6574-201ENSMUST00000120037 362 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm16355-201ENSMUST00000128606 231 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm2966-201ENSMUST00000166052 481 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm33354-201ENSMUST00000195448 906 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm43804-201ENSMUST00000198280 456 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm32222-201ENSMUST00000203296 298 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.56□□□□□ -2
Ccdc40Q8BI79 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm24044-201ENSMUST00000083107 156 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.56□□□□□ -2
Ccdc40Q8BI79 Gm22779-201ENSMUST00000104085 107 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm23175-201ENSMUST00000104371 132 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Mir466k-201ENSMUST00000116774 122 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Mir1927-201ENSMUST00000158579 109 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm25451-201ENSMUST00000177832 121 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm25361-201ENSMUST00000179358 76 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm28627-201ENSMUST00000186141 453 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm5116-201ENSMUST00000187732 463 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm29627-201ENSMUST00000187984 463 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Gm45452-201ENSMUST00000210905 177 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.55□□□□□ -2
Ccdc40Q8BI79 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc40Q8BI79 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm24049-201ENSMUST00000102409 100 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm25563-201ENSMUST00000104603 74 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm13355-201ENSMUST00000117996 317 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm11943-201ENSMUST00000119473 327 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm9225-201ENSMUST00000121921 836 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm25706-201ENSMUST00000157828 247 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.54□□□□□ -2
Ccdc40Q8BI79 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm22716-201ENSMUST00000177596 107 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm28917-201ENSMUST00000187294 237 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm28766-201ENSMUST00000191086 234 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms