Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm22936-201ENSMUST00000103955 126 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm14816-201ENSMUST00000117174 294 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm11693-201ENSMUST00000119625 565 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm23887-201ENSMUST00000122683 172 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm23232-201ENSMUST00000157300 105 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm24905-201ENSMUST00000158129 104 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Mir5710-201ENSMUST00000176884 69 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm20693-201ENSMUST00000177431 211 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim56Q80VI1 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm43955-201ENSMUST00000204332 142 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm45273-201ENSMUST00000211559 281 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 AC160863.1-201ENSMUST00000218412 317 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm24626-201ENSMUST00000082621 161 ntBASIC4.53□□□□□ -1.68
Trim56Q80VI1 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trim56Q80VI1 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim56Q80VI1 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim56Q80VI1 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim56Q80VI1 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim56Q80VI1 Gm24629-201ENSMUST00000122762 89 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Gm25054-201ENSMUST00000157370 97 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim56Q80VI1 Gm10292-201ENSMUST00000183142 581 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Gm45539-201ENSMUST00000210313 428 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Gm45860-201ENSMUST00000212700 334 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.52□□□□□ -1.69
Trim56Q80VI1 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim56Q80VI1 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm15926-201ENSMUST00000120492 550 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm24839-201ENSMUST00000122602 107 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm24961-201ENSMUST00000157918 184 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm23892-201ENSMUST00000158105 130 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm22611-201ENSMUST00000158288 150 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm25606-201ENSMUST00000158363 95 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm24487-201ENSMUST00000178017 63 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm22348-201ENSMUST00000178674 79 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm7909-201ENSMUST00000182688 614 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm44521-201ENSMUST00000206469 217 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm5899-201ENSMUST00000071770 270 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm23625-201ENSMUST00000082457 100 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Snord47-201ENSMUST00000083034 77 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm22973-201ENSMUST00000083298 191 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.51□□□□□ -1.69
Trim56Q80VI1 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Trim56Q80VI1 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Mir881-201ENSMUST00000104844 78 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm23184-201ENSMUST00000122594 131 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm12238-201ENSMUST00000127764 124 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm25967-201ENSMUST00000157168 147 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm26414-201ENSMUST00000157674 269 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm24750-201ENSMUST00000157843 104 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm23084-201ENSMUST00000157850 114 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm22433-201ENSMUST00000158550 142 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm27760-201ENSMUST00000185048 114 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm29704-201ENSMUST00000196011 253 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Mir7661-201ENSMUST00000197023 61 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Mir3535-201ENSMUST00000197651 147 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm6615-201ENSMUST00000199426 631 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm44960-201ENSMUST00000207403 141 ntBASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms