Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm23925-202ENSMUST00000188429 132 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Gm6615-201ENSMUST00000199426 631 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Gm42578-201ENSMUST00000199960 194 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Gm44259-201ENSMUST00000204996 298 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Gm44208-201ENSMUST00000205199 421 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Gm44922-201ENSMUST00000206690 90 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Scaf4Q6PFF0 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm13737-201ENSMUST00000119793 232 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm7618-201ENSMUST00000121643 171 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm25054-201ENSMUST00000157370 97 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm17187-201ENSMUST00000164622 410 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Mir5129-201ENSMUST00000174938 78 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm26195-201ENSMUST00000175035 101 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm27470-201ENSMUST00000184070 210 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm27387-201ENSMUST00000184583 116 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm7182-201ENSMUST00000193351 732 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm37997-201ENSMUST00000193515 267 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm9402-201ENSMUST00000196849 388 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm4644-201ENSMUST00000197587 400 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Gm16419-201ENSMUST00000221057 625 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scaf4Q6PFF0 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm4736-201ENSMUST00000100870 380 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm22784-201ENSMUST00000104088 132 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm26273-201ENSMUST00000104180 131 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm25637-201ENSMUST00000157529 107 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm24997-201ENSMUST00000157910 105 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm23198-201ENSMUST00000158811 91 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm22118-201ENSMUST00000175593 171 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm23355-201ENSMUST00000177614 107 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm23215-201ENSMUST00000178153 121 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm23148-201ENSMUST00000180367 107 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Mir6372-201ENSMUST00000185114 109 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm28623-201ENSMUST00000187219 192 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm37713-201ENSMUST00000191746 198 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm43427-201ENSMUST00000198188 331 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm18213-201ENSMUST00000207850 178 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 AC154626.1-201ENSMUST00000226070 311 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Mecom-201ENSMUST00000061088 348 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm25078-201ENSMUST00000082530 107 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm25812-201ENSMUST00000082751 103 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm22685-201ENSMUST00000082848 106 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Gm26204-201ENSMUST00000082906 107 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.91□□□□□ -1.78
Scaf4Q6PFF0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.9□□□□□ -1.78
Scaf4Q6PFF0 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms