Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col11a1Q61245 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.55□□□□□ -2.16
Col11a1Q61245 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm14879-201ENSMUST00000117308 507 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm12881-201ENSMUST00000121191 203 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm14366-201ENSMUST00000121970 730 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm25981-201ENSMUST00000157921 295 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Mir5099-201ENSMUST00000175257 74 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm17935-201ENSMUST00000196649 772 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm42516-201ENSMUST00000198691 767 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm43228-201ENSMUST00000200735 264 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm45273-201ENSMUST00000211559 281 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm45696-201ENSMUST00000212088 985 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Rny1-201ENSMUST00000083767 112 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm12656-201ENSMUST00000118149 577 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm2003-201ENSMUST00000118537 636 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm13059-201ENSMUST00000119881 398 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm5646-201ENSMUST00000120568 714 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm2005-201ENSMUST00000120759 542 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm1989-201ENSMUST00000126244 636 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm16129-201ENSMUST00000152628 486 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm25944-201ENSMUST00000178758 94 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm27233-201ENSMUST00000184030 307 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm43979-201ENSMUST00000203179 475 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm19709-201ENSMUST00000215403 482 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.54□□□□□ -2.16
Col11a1Q61245 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 CT009510.2-203ENSMUST00000226704 2136 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm25109-201ENSMUST00000122474 114 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm22843-201ENSMUST00000157710 134 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.53□□□□□ -2.16
Col11a1Q61245 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm27248-201ENSMUST00000184004 166 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm6651-201ENSMUST00000189471 271 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm44348-201ENSMUST00000200165 122 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.53□□□□□ -2.16
Col11a1Q61245 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Col11a1Q61245 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.53□□□□□ -2.17
Col11a1Q61245 Gm22516-201ENSMUST00000158266 124 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm16147-201ENSMUST00000162143 373 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm24863-201ENSMUST00000179499 107 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm27964-201ENSMUST00000185195 62 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm38281-201ENSMUST00000192301 315 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm37709-201ENSMUST00000195074 600 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm44395-201ENSMUST00000197056 153 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm6369-201ENSMUST00000069626 412 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col11a1Q61245 Mir421-201ENSMUST00000083575 76 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm13331-201ENSMUST00000117500 448 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm16053-201ENSMUST00000120511 188 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm16458-201ENSMUST00000121428 502 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm15147-201ENSMUST00000122263 483 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm23221-201ENSMUST00000158118 93 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm23777-201ENSMUST00000158994 259 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm26365-201ENSMUST00000179177 94 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm43142-201ENSMUST00000198670 361 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm18268-201ENSMUST00000208445 943 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Mir10b-201ENSMUST00000083566 68 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col11a1Q61245 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.52□□□□□ -2.17
Col11a1Q61245 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms