Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm22264-201ENSMUST00000178200 107 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm25670-201ENSMUST00000178423 107 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm26239-201ENSMUST00000178842 107 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm24267-201ENSMUST00000179841 107 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm27698-201ENSMUST00000184060 249 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Mir6363-201ENSMUST00000184880 114 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm19257-201ENSMUST00000186121 183 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm37757-201ENSMUST00000193072 210 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm44320-201ENSMUST00000199276 86 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm44718-201ENSMUST00000206886 359 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm45395-201ENSMUST00000209891 559 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm24292-201ENSMUST00000082888 107 ntBASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6-2Q5R1I4 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Mir344e-201ENSMUST00000104677 66 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm22072-201ENSMUST00000116850 121 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm12213-201ENSMUST00000119924 353 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm22597-201ENSMUST00000157602 80 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm26622-201ENSMUST00000180520 298 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm27028-201ENSMUST00000182303 399 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm27817-201ENSMUST00000184302 233 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm29597-201ENSMUST00000188035 308 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm38311-201ENSMUST00000192945 165 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm38333-201ENSMUST00000193608 604 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm43804-201ENSMUST00000198280 456 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm43587-201ENSMUST00000199590 204 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm22810-201ENSMUST00000082741 158 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm22508-201ENSMUST00000082772 110 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6-2Q5R1I4 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm25876-201ENSMUST00000104329 119 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm13510-201ENSMUST00000118659 429 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm22452-201ENSMUST00000122804 104 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm8338-201ENSMUST00000163928 363 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Mir8090-201ENSMUST00000185078 136 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm28299-201ENSMUST00000189908 339 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm45590-201ENSMUST00000209715 262 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Gm22061-201ENSMUST00000082557 107 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.06□□□□□ -2.08
Trav6-2Q5R1I4 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms