Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm27722-201ENSMUST00000183908 76 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29550-201ENSMUST00000185543 285 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Mir6962-201ENSMUST00000199512 63 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.07□□□□□ -2.24
Trav6d-4Q5R1I0 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Mir343-201ENSMUST00000102360 75 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm11359-201ENSMUST00000120039 567 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Snord13-201ENSMUST00000157627 104 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23083-201ENSMUST00000157851 116 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23181-201ENSMUST00000158685 110 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Mir5129-201ENSMUST00000174938 78 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21064-202ENSMUST00000190583 278 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm44011-201ENSMUST00000203336 394 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm16261-201ENSMUST00000096813 205 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.06□□□□□ -2.24
Trav6d-4Q5R1I0 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm15443-201ENSMUST00000118947 820 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25624-201ENSMUST00000157222 275 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22535-201ENSMUST00000158174 119 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm24885-201ENSMUST00000158783 270 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm19932-201ENSMUST00000177033 313 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Mir7063-201ENSMUST00000184158 91 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm28453-203ENSMUST00000187041 189 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm42672-201ENSMUST00000197821 352 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm43228-201ENSMUST00000200735 264 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm44585-201ENSMUST00000207150 607 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Gm46993-201ENSMUST00000220708 259 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Mir211-201ENSMUST00000083651 106 ntBASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Trav6d-4Q5R1I0 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm15497-201ENSMUST00000119137 551 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm14402-201ENSMUST00000122217 508 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm13131-201ENSMUST00000122228 321 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22315-201ENSMUST00000158010 143 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26004-201ENSMUST00000158804 116 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm17062-201ENSMUST00000166987 461 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Mir6338-201ENSMUST00000183389 109 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Mir6376-201ENSMUST00000185149 131 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29603-201ENSMUST00000186792 334 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm43911-201ENSMUST00000203097 76 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm17987-201ENSMUST00000206902 603 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm18991-201ENSMUST00000209225 746 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 AC154562.1-201ENSMUST00000226140 966 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25788-201ENSMUST00000082721 131 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Mir325-201ENSMUST00000083491 98 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trav6d-4Q5R1I0 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26504-201ENSMUST00000102033 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22780-201ENSMUST00000104084 132 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm13331-201ENSMUST00000117500 448 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm14835-201ENSMUST00000119039 315 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm16373-201ENSMUST00000129517 303 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm24086-201ENSMUST00000175171 98 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26502-201ENSMUST00000177732 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l13-201ENSMUST00000177737 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25350-201ENSMUST00000177849 94 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms