Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm5900-201ENSMUST00000179862 375 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Mir7667-201ENSMUST00000183866 63 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm24948-201ENSMUST00000082866 207 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm2348-201ENSMUST00000108782 300 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm13728-201ENSMUST00000117471 400 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14868-201ENSMUST00000117840 216 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14049-201ENSMUST00000121009 636 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm24783-201ENSMUST00000157639 100 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm21885-201ENSMUST00000178891 327 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm24969-201ENSMUST00000180331 79 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm27991-201ENSMUST00000184804 137 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm43979-201ENSMUST00000203179 475 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm18991-201ENSMUST00000209225 746 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm19326-201ENSMUST00000219818 326 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr197-201ENSMUST00000080031 926 ntBASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trav5d-4Q5R1F6 Gm24984-201ENSMUST00000104454 133 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm12191-201ENSMUST00000118307 348 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm15312-201ENSMUST00000118827 271 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm6444-201ENSMUST00000119611 458 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14867-201ENSMUST00000120156 866 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14915-201ENSMUST00000120747 204 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm12926-201ENSMUST00000121158 409 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14709-201ENSMUST00000121225 304 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm23958-201ENSMUST00000157207 105 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm5277-201ENSMUST00000164923 556 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm21827-201ENSMUST00000178247 423 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Mir6379-201ENSMUST00000183392 115 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm33354-201ENSMUST00000195448 906 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm5317-201ENSMUST00000204445 847 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm19140-201ENSMUST00000209790 421 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm23650-201ENSMUST00000083355 70 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Trav5d-4Q5R1F6 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14932-201ENSMUST00000117112 453 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14694-201ENSMUST00000121856 282 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14770-201ENSMUST00000122197 312 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm25279-201ENSMUST00000122608 133 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm22843-201ENSMUST00000157710 134 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm22664-201ENSMUST00000158719 105 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Mir7050-201ENSMUST00000184636 60 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm29011-201ENSMUST00000191059 712 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm37455-201ENSMUST00000191993 529 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm44585-201ENSMUST00000207150 607 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm30738-201ENSMUST00000221346 502 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm25788-201ENSMUST00000082721 131 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Gm25411-201ENSMUST00000083760 151 ntBASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Mir3096-201ENSMUST00000116685 71 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm16428-201ENSMUST00000121193 723 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm25621-201ENSMUST00000157223 114 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms