Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm25360-201ENSMUST00000178786 191 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 Mir6335-201ENSMUST00000184081 98 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 Gm28825-201ENSMUST00000186233 238 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 Gm28358-202ENSMUST00000189292 223 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 Gm43978-201ENSMUST00000203491 451 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 CT030182.3-201ENSMUST00000225986 582 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 Gm24661-201ENSMUST00000083205 104 ntBASIC1.78□□□□□ -2.12
Trav3-3Q5R1C3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Trav3-3Q5R1C3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm26147-201ENSMUST00000104479 114 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm25563-201ENSMUST00000104603 74 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm14899-201ENSMUST00000118673 548 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm22584-201ENSMUST00000177935 92 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Mir6408-201ENSMUST00000183643 91 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm33354-201ENSMUST00000195448 906 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm43114-201ENSMUST00000198298 343 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 AC168266.1-201ENSMUST00000216024 226 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm30534-201ENSMUST00000217928 207 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm23040-201ENSMUST00000083869 163 ntBASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav3-3Q5R1C3 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm22779-201ENSMUST00000104085 107 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm23128-201ENSMUST00000104257 132 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm11221-201ENSMUST00000117230 597 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm12765-201ENSMUST00000117273 615 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm11438-201ENSMUST00000121582 189 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm24839-201ENSMUST00000122602 107 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm23956-201ENSMUST00000157211 119 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm26271-201ENSMUST00000158349 104 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm25996-201ENSMUST00000175393 117 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm25451-201ENSMUST00000177832 121 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm25361-201ENSMUST00000179358 76 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Mir6370-201ENSMUST00000183510 120 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Mir7013-201ENSMUST00000183540 72 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm29216-201ENSMUST00000187117 492 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm37000-201ENSMUST00000193058 428 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm23128-202ENSMUST00000196578 133 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm24350-202ENSMUST00000198309 132 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm45590-201ENSMUST00000209715 262 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm7065-201ENSMUST00000222150 474 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm9370-201ENSMUST00000222787 609 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Snord14d-201ENSMUST00000083424 86 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm26166-201ENSMUST00000083788 107 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Gm23042-201ENSMUST00000083866 101 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Olfr575-201ENSMUST00000084812 957 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.76□□□□□ -2.13
Trav3-3Q5R1C3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Mir92-1-201ENSMUST00000102108 80 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm22322-201ENSMUST00000157151 111 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm24771-201ENSMUST00000158508 137 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm2966-201ENSMUST00000166052 481 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm4468-201ENSMUST00000170206 294 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm5116-201ENSMUST00000187732 463 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm29627-201ENSMUST00000187984 463 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm28113-201ENSMUST00000188280 229 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm36984-201ENSMUST00000192770 235 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Mir7215-201ENSMUST00000200383 51 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm44966-201ENSMUST00000208096 157 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm46103-201ENSMUST00000217614 341 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Gm2436-201ENSMUST00000219562 774 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Trav3-3Q5R1C3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trav3-3Q5R1C3 Gm22782-201ENSMUST00000104082 132 ntBASIC1.74□□□□□ -2.13
Trav3-3Q5R1C3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trav3-3Q5R1C3 Gm12636-201ENSMUST00000117395 624 ntBASIC1.74□□□□□ -2.13
Trav3-3Q5R1C3 Gm15175-201ENSMUST00000117629 132 ntBASIC1.74□□□□□ -2.13
Trav3-3Q5R1C3 Gm12656-201ENSMUST00000118149 577 ntBASIC1.74□□□□□ -2.13
Trav3-3Q5R1C3 Gm6071-201ENSMUST00000119561 440 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms