Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm33354-201ENSMUST00000195448 906 ntBASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm45116-201ENSMUST00000207392 275 ntBASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm46994-201ENSMUST00000221523 219 ntBASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm14428-201ENSMUST00000120408 822 ntBASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Gm9071-201ENSMUST00000165915 474 ntBASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Gm23355-201ENSMUST00000177614 107 ntBASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Gm37997-201ENSMUST00000193515 267 ntBASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Gm44585-201ENSMUST00000207150 607 ntBASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Gm23721-201ENSMUST00000083005 107 ntBASIC1.51□□□□□ -2.17
Ccdc88bQ4QRL3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 Gm23466-201ENSMUST00000157133 106 ntBASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 Gm17990-201ENSMUST00000211728 553 ntBASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 Gm12393-201ENSMUST00000117084 848 ntBASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 Gm27587-201ENSMUST00000185116 163 ntBASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.5□□□□□ -2.17
Ccdc88bQ4QRL3 Gm7739-201ENSMUST00000221131 1560 ntBASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 Gm12731-201ENSMUST00000120932 268 ntBASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 Gm13676-201ENSMUST00000122185 591 ntBASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 Gm23886-201ENSMUST00000122684 313 ntBASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc88bQ4QRL3 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Gm26435-201ENSMUST00000179026 107 ntBASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ccdc88bQ4QRL3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.47□□□□□ -2.17
Ccdc88bQ4QRL3 Gm28862-201ENSMUST00000188246 163 ntBASIC1.47□□□□□ -2.17
Ccdc88bQ4QRL3 Gm9632-201ENSMUST00000195934 643 ntBASIC1.47□□□□□ -2.17
Ccdc88bQ4QRL3 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.47□□□□□ -2.17
Ccdc88bQ4QRL3 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.47□□□□□ -2.17
Ccdc88bQ4QRL3 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Gm23994-201ENSMUST00000158059 88 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Gm25996-201ENSMUST00000175393 117 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Gm26701-201ENSMUST00000181571 234 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Gm25079-201ENSMUST00000082529 203 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.46□□□□□ -2.18
Ccdc88bQ4QRL3 Gm20526-201ENSMUST00000173416 158 ntBASIC1.45□□□□□ -2.18
Ccdc88bQ4QRL3 Gm38044-201ENSMUST00000192964 487 ntBASIC1.45□□□□□ -2.18
Ccdc88bQ4QRL3 Gm9402-201ENSMUST00000196849 388 ntBASIC1.45□□□□□ -2.18
Ccdc88bQ4QRL3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.45□□□□□ -2.18
Ccdc88bQ4QRL3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.45□□□□□ -2.18
Ccdc88bQ4QRL3 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.45□□□□□ -2.18
Ccdc88bQ4QRL3 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ccdc88bQ4QRL3 Gm22048-201ENSMUST00000104721 89 ntBASIC1.44□□□□□ -2.18
Ccdc88bQ4QRL3 Gm25491-201ENSMUST00000158733 308 ntBASIC1.44□□□□□ -2.18
Ccdc88bQ4QRL3 Gm28872-201ENSMUST00000191518 158 ntBASIC1.44□□□□□ -2.18
Ccdc88bQ4QRL3 Gm44720-201ENSMUST00000206076 260 ntBASIC1.44□□□□□ -2.18
Ccdc88bQ4QRL3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ccdc88bQ4QRL3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.44□□□□□ -2.18
Ccdc88bQ4QRL3 Gm11843-201ENSMUST00000118984 425 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Gm11572-201ENSMUST00000119164 120 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Mir1904-201ENSMUST00000122702 80 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Gm14591-201ENSMUST00000120407 518 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Gm16129-201ENSMUST00000152628 486 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 AC153662.1-201ENSMUST00000222220 270 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 AC173481.1-201ENSMUST00000223351 270 ntBASIC1.43□□□□□ -2.18
Ccdc88bQ4QRL3 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Gm6113-201ENSMUST00000180319 639 ntBASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Trbv6-201ENSMUST00000193743 276 ntBASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Gm45789-201ENSMUST00000213038 364 ntBASIC1.42□□□□□ -2.18
Ccdc88bQ4QRL3 Gm21990-201ENSMUST00000124692 383 ntBASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 Gm15281-201ENSMUST00000125181 351 ntBASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 Gm15275-201ENSMUST00000154752 347 ntBASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 Gm22217-201ENSMUST00000157556 313 ntBASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.41□□□□□ -2.18
Ccdc88bQ4QRL3 Mir101a-201ENSMUST00000083517 83 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms