Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm16328-201ENSMUST00000126985 196 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm25339-201ENSMUST00000157458 232 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm22098-201ENSMUST00000157930 85 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Upf3bQ3ULL6 Gm14898-201ENSMUST00000120202 645 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm16355-201ENSMUST00000128606 231 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm22227-201ENSMUST00000157356 259 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm22192-201ENSMUST00000175128 85 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm28745-201ENSMUST00000190069 305 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm37568-201ENSMUST00000191755 364 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm43286-201ENSMUST00000197420 424 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm25402-201ENSMUST00000082966 131 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm25632-201ENSMUST00000083112 85 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm25755-201ENSMUST00000083396 107 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm22866-201ENSMUST00000083947 177 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.11□□□□□ -2.07
Upf3bQ3ULL6 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21827-201ENSMUST00000178247 423 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm21726-201ENSMUST00000179654 392 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm43582-201ENSMUST00000196149 343 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm43171-201ENSMUST00000199882 291 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm44212-201ENSMUST00000205016 897 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm24044-201ENSMUST00000083107 156 ntBASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Upf3bQ3ULL6 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm23469-201ENSMUST00000157131 104 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm24908-201ENSMUST00000157294 127 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm23324-201ENSMUST00000157421 131 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm23548-201ENSMUST00000158963 106 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Mir6901-201ENSMUST00000185062 62 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm37557-201ENSMUST00000191640 139 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm43955-201ENSMUST00000204332 142 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm7984-201ENSMUST00000060640 538 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Mir322-201ENSMUST00000083484 95 ntBASIC2.09□□□□□ -2.07
Upf3bQ3ULL6 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm24049-201ENSMUST00000102409 100 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm13876-201ENSMUST00000118451 261 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm6664-201ENSMUST00000119138 468 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm24836-201ENSMUST00000122609 108 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20794-201ENSMUST00000177626 628 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm24304-201ENSMUST00000177635 107 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm22264-201ENSMUST00000178200 107 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm27979-201ENSMUST00000185126 56 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm27959-201ENSMUST00000185172 111 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm28356-202ENSMUST00000187566 858 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20885-201ENSMUST00000190192 654 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm37550-201ENSMUST00000193230 463 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm33571-201ENSMUST00000193271 657 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms