Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm24280-201ENSMUST00000104237 134 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm25563-201ENSMUST00000104603 74 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Mir190b-201ENSMUST00000104803 80 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm15659-201ENSMUST00000118881 341 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm14359-201ENSMUST00000118883 424 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm15113-201ENSMUST00000119280 836 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm11357-201ENSMUST00000119758 954 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm14360-201ENSMUST00000120670 393 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm13913-201ENSMUST00000121126 260 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm23885-201ENSMUST00000122682 294 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm9498-201ENSMUST00000140849 291 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm23538-201ENSMUST00000157535 101 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Mir3066-201ENSMUST00000175296 83 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm18417-201ENSMUST00000176564 648 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Mir6541-201ENSMUST00000183649 110 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm43652-201ENSMUST00000196219 675 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm35212-201ENSMUST00000196672 606 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm44083-201ENSMUST00000203114 337 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm44449-201ENSMUST00000203610 153 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm44478-201ENSMUST00000204875 114 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm5471-201ENSMUST00000072732 337 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.35□□□□□ -2.03
Upf3aQ3ULJ3 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm24430-201ENSMUST00000104077 104 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm22091-201ENSMUST00000116908 127 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm13439-201ENSMUST00000117541 409 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm13588-201ENSMUST00000120026 135 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm12044-201ENSMUST00000120335 213 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm12639-201ENSMUST00000121400 493 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm11438-201ENSMUST00000121582 189 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm26173-201ENSMUST00000158416 136 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm24897-201ENSMUST00000179033 107 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Mir3569-201ENSMUST00000185080 58 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm29516-201ENSMUST00000190402 468 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm37037-201ENSMUST00000194475 424 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm45150-201ENSMUST00000206051 467 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Gm17991-201ENSMUST00000208139 297 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Mir208a-201ENSMUST00000083498 83 ntBASIC2.34□□□□□ -2.03
Upf3aQ3ULJ3 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Upf3aQ3ULJ3 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.34□□□□□ -2.04
Upf3aQ3ULJ3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Upf3aQ3ULJ3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Upf3aQ3ULJ3 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.34□□□□□ -2.04
Upf3aQ3ULJ3 Gm24126-201ENSMUST00000104111 106 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm14594-201ENSMUST00000118052 537 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm11460-201ENSMUST00000118200 361 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm14590-201ENSMUST00000118934 537 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm15106-201ENSMUST00000119691 821 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm15112-201ENSMUST00000120152 860 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm23118-201ENSMUST00000122657 187 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm12238-201ENSMUST00000127764 124 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm23230-201ENSMUST00000157298 133 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm14596-201ENSMUST00000180268 537 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm14595-201ENSMUST00000180335 537 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Mir6382-201ENSMUST00000184055 110 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm28169-201ENSMUST00000190342 345 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm38044-201ENSMUST00000192964 487 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm37000-201ENSMUST00000193058 428 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm45658-201ENSMUST00000209197 580 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Upf3aQ3ULJ3 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms