Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm18337-201ENSMUST00000219023 5762 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm26387-201ENSMUST00000104238 132 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm12765-201ENSMUST00000117273 615 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm25243-201ENSMUST00000174912 207 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm26622-201ENSMUST00000180520 298 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm28579-201ENSMUST00000186143 369 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Olfr197-201ENSMUST00000080031 926 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm26446-201ENSMUST00000082455 103 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm22577-201ENSMUST00000083731 109 ntBASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ddb1Q3U1J4 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Ddb1Q3U1J4 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Ddb1Q3U1J4 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.15□□□□□ -1.74
Ddb1Q3U1J4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ddb1Q3U1J4 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Ddb1Q3U1J4 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm22534-201ENSMUST00000158173 104 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Nron-204ENSMUST00000158971 370 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm4761-201ENSMUST00000178086 582 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm27505-201ENSMUST00000185071 110 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm28155-201ENSMUST00000191066 151 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm22245-201ENSMUST00000082479 103 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Snora70-201ENSMUST00000083047 137 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Mir452-201ENSMUST00000093629 85 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.15□□□□□ -1.75
Ddb1Q3U1J4 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm12803-201ENSMUST00000118907 821 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm14570-201ENSMUST00000119444 391 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm8121-201ENSMUST00000153583 499 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm23169-201ENSMUST00000157157 112 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm22791-201ENSMUST00000157232 145 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm25283-201ENSMUST00000157272 77 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm7925-201ENSMUST00000166690 401 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm23725-201ENSMUST00000177876 107 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm29229-201ENSMUST00000188874 323 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm37313-201ENSMUST00000191673 290 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm37743-201ENSMUST00000194645 376 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm44324-201ENSMUST00000198517 135 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm7692-201ENSMUST00000213534 409 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm26107-201ENSMUST00000083972 107 ntBASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddb1Q3U1J4 Gm24096-201ENSMUST00000103905 110 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Gm13085-201ENSMUST00000118356 171 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Gm22988-201ENSMUST00000122759 144 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Gm25341-201ENSMUST00000157461 268 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Gm26180-201ENSMUST00000179942 107 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Gm29350-201ENSMUST00000189141 541 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Mir7682-201ENSMUST00000198467 58 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Gm17989-201ENSMUST00000211543 412 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ddb1Q3U1J4 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ddb1Q3U1J4 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ddb1Q3U1J4 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Ddb1Q3U1J4 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.12□□□□□ -1.75
Ddb1Q3U1J4 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ddb1Q3U1J4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ddb1Q3U1J4 Gm26147-201ENSMUST00000104479 114 ntBASIC4.12□□□□□ -1.75
Ddb1Q3U1J4 Gm15147-201ENSMUST00000122263 483 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms