Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm43407-201ENSMUST00000199816 317 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm44336-201ENSMUST00000203696 468 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm18540-201ENSMUST00000204025 526 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm26225-201ENSMUST00000082508 135 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm23451-201ENSMUST00000083328 122 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm10161-201ENSMUST00000091506 204 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Col28a1Q2UY11 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm23941-201ENSMUST00000101953 107 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm12495-201ENSMUST00000119750 447 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm25883-201ENSMUST00000157781 271 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm26141-201ENSMUST00000175299 126 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm24811-201ENSMUST00000175313 100 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Mir5098-201ENSMUST00000175320 82 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm23864-201ENSMUST00000177607 107 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm26960-201ENSMUST00000182263 412 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Mir6993-201ENSMUST00000184912 65 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm45252-201ENSMUST00000211579 397 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm29884-201ENSMUST00000218403 453 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm10237-201ENSMUST00000078393 273 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Gm23297-201ENSMUST00000083184 127 ntBASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Col28a1Q2UY11 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm14825-201ENSMUST00000113538 701 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Mir1198-201ENSMUST00000116995 121 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm12722-201ENSMUST00000118507 493 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm12815-201ENSMUST00000121737 135 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm24409-201ENSMUST00000157881 152 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm25643-201ENSMUST00000158874 103 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm24819-201ENSMUST00000175094 166 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm27733-201ENSMUST00000184803 68 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm29350-201ENSMUST00000189141 541 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm32033-201ENSMUST00000193483 339 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm44349-201ENSMUST00000197048 123 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm44385-201ENSMUST00000198781 81 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm2189-201ENSMUST00000201419 429 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm44513-201ENSMUST00000206811 439 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm36776-201ENSMUST00000207006 203 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm19126-201ENSMUST00000207896 509 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm16419-201ENSMUST00000221057 625 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm46389-201ENSMUST00000223199 392 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 AF357341-201ENSMUST00000083088 75 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm22577-201ENSMUST00000083731 109 ntBASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col28a1Q2UY11 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm12568-201ENSMUST00000117362 624 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms