Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm27928-201ENSMUST00000183747 256 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Igkv1-115-201ENSMUST00000198714 302 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm26494-201ENSMUST00000083154 143 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm24493-201ENSMUST00000083805 143 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col17a1Q07563 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm45039-201ENSMUST00000209181 3477 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm26101-201ENSMUST00000157246 105 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm22537-201ENSMUST00000158172 199 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm25360-201ENSMUST00000178786 191 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Mir6715-201ENSMUST00000184990 57 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm43739-201ENSMUST00000198294 307 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Mir7227-201ENSMUST00000200408 59 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm18703-201ENSMUST00000215318 333 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm9318-201ENSMUST00000222444 438 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm25579-201ENSMUST00000083407 106 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm23503-201ENSMUST00000083903 107 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm24446-201ENSMUST00000083982 156 ntBASIC4.88□□□□□ -1.63
Col17a1Q07563 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
Col17a1Q07563 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Col17a1Q07563 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col17a1Q07563 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col17a1Q07563 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col17a1Q07563 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col17a1Q07563 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col17a1Q07563 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm22149-201ENSMUST00000104442 136 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm25563-201ENSMUST00000104603 74 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm12230-201ENSMUST00000118301 454 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm23957-201ENSMUST00000157209 90 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm23671-201ENSMUST00000157472 103 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm26412-201ENSMUST00000157666 55 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm25706-201ENSMUST00000157828 247 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm17166-201ENSMUST00000172006 431 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm24167-201ENSMUST00000177733 124 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm24028-201ENSMUST00000178991 124 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Mir7013-201ENSMUST00000183540 72 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Mir7039-201ENSMUST00000183852 85 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm45439-201ENSMUST00000211723 359 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col17a1Q07563 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Gm24319-201ENSMUST00000083389 107 ntBASIC4.87□□□□□ -1.63
Col17a1Q07563 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col17a1Q07563 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm23803-201ENSMUST00000104610 132 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm23124-201ENSMUST00000157650 107 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm24075-201ENSMUST00000158175 72 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm23268-201ENSMUST00000175494 78 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Mir6406-201ENSMUST00000183592 120 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm28744-201ENSMUST00000189939 340 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm36984-201ENSMUST00000192770 235 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Mir9-1-201ENSMUST00000199907 89 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.86□□□□□ -1.63
Col17a1Q07563 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 AC151833.1-201ENSMUST00000227752 574 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Snord47-201ENSMUST00000083034 77 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Gm25482-201ENSMUST00000083225 107 ntBASIC4.86□□□□□ -1.63
Col17a1Q07563 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col17a1Q07563 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.86□□□□□ -1.63
Col17a1Q07563 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col17a1Q07563 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.85□□□□□ -1.63
Col17a1Q07563 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col17a1Q07563 Gm25938-201ENSMUST00000104139 166 ntBASIC4.85□□□□□ -1.63
Col17a1Q07563 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms