Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Mir3535-201ENSMUST00000197651 147 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm25203-202ENSMUST00000200458 216 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm44844-201ENSMUST00000207242 336 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm25203-201ENSMUST00000082842 215 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Mir10a-201ENSMUST00000083585 110 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a1Q04857 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a1Q04857 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a1Q04857 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.48□□□□□ -1.69
Col6a1Q04857 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a1Q04857 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a1Q04857 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm11598-201ENSMUST00000119257 357 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm11718-201ENSMUST00000119942 537 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm14875-201ENSMUST00000120881 319 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm14581-201ENSMUST00000121726 198 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.47□□□□□ -1.69
Col6a1Q04857 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm25535-201ENSMUST00000175364 125 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm10067-201ENSMUST00000179462 348 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm27249-201ENSMUST00000185049 328 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm37763-201ENSMUST00000193445 120 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Mir7661-201ENSMUST00000197023 61 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm44099-201ENSMUST00000203299 112 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm19908-201ENSMUST00000204684 391 ntBASIC4.47□□□□□ -1.69
Col6a1Q04857 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a1Q04857 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a1Q04857 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a1Q04857 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Col6a1Q04857 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col6a1Q04857 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a1Q04857 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm650-201ENSMUST00000144428 1551 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm24423-201ENSMUST00000101982 106 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm24586-201ENSMUST00000116695 89 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm24831-201ENSMUST00000116778 126 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm15029-201ENSMUST00000119742 199 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm26479-201ENSMUST00000122620 106 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm23540-201ENSMUST00000157543 164 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm23666-201ENSMUST00000158053 116 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm25654-201ENSMUST00000158467 88 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm23474-201ENSMUST00000158884 75 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm24167-201ENSMUST00000177733 124 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm24028-201ENSMUST00000178991 124 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm27245-201ENSMUST00000184385 376 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Mir6372-201ENSMUST00000185114 109 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm29140-201ENSMUST00000190187 476 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm9696-202ENSMUST00000191541 830 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm18921-201ENSMUST00000221798 366 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm22061-201ENSMUST00000082557 107 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm22739-201ENSMUST00000083437 160 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.46□□□□□ -1.7
Col6a1Q04857 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a1Q04857 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a1Q04857 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm23226-201ENSMUST00000116927 103 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm15162-201ENSMUST00000119325 283 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm25390-201ENSMUST00000157341 103 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm23667-201ENSMUST00000157466 120 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm25637-201ENSMUST00000157529 107 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm29657-201ENSMUST00000189807 342 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms