Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mir322-201ENSMUST00000083484 95 ntBASIC2.41□□□□□ -2.02
Sox3P53784 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Sox3P53784 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.4□□□□□ -2.02
Sox3P53784 Mir344e-201ENSMUST00000104677 66 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm22486-201ENSMUST00000116815 137 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Mir1192-201ENSMUST00000116976 121 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm14069-201ENSMUST00000120815 229 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm5396-201ENSMUST00000121222 532 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm7209-201ENSMUST00000122339 333 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm24601-201ENSMUST00000157970 143 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm22803-201ENSMUST00000158049 283 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm22947-201ENSMUST00000158559 91 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm23704-201ENSMUST00000158844 340 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Sox3P53784 Mir6402-201ENSMUST00000183406 80 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Mir8106-201ENSMUST00000184520 139 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm29550-201ENSMUST00000185543 285 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm44387-201ENSMUST00000196298 145 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm43669-201ENSMUST00000198229 436 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.4□□□□□ -2.03
Sox3P53784 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Gm18703-201ENSMUST00000215318 333 ntBASIC2.4□□□□□ -2.03
Sox3P53784 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.4□□□□□ -2.03
Sox3P53784 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.4□□□□□ -2.03
Sox3P53784 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sox3P53784 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
Sox3P53784 Gm26458-201ENSMUST00000082832 128 ntBASIC2.4□□□□□ -2.03
Sox3P53784 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sox3P53784 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sox3P53784 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Sox3P53784 Gm22091-201ENSMUST00000116908 127 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm12213-201ENSMUST00000119924 353 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm14736-201ENSMUST00000121470 336 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm25220-201ENSMUST00000157546 95 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm23078-201ENSMUST00000157848 148 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm3111-201ENSMUST00000167426 490 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm25361-201ENSMUST00000179358 76 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm9892-201ENSMUST00000182415 992 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm5116-201ENSMUST00000187732 463 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm29627-201ENSMUST00000187984 463 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm28474-201ENSMUST00000188501 315 ntBASIC2.39□□□□□ -2.03
Sox3P53784 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm9251-201ENSMUST00000197202 628 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm19089-201ENSMUST00000197207 613 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm3442-201ENSMUST00000216808 710 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm20304-201ENSMUST00000218168 444 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm17890-201ENSMUST00000221419 757 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm5374-201ENSMUST00000222868 657 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Gm46389-201ENSMUST00000223199 392 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.39□□□□□ -2.03
Sox3P53784 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Sox3P53784 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm23723-201ENSMUST00000082996 132 ntBASIC2.39□□□□□ -2.03
Sox3P53784 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sox3P53784 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Sox3P53784 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.38□□□□□ -2.03
Sox3P53784 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Sox3P53784 Gm12876-201ENSMUST00000120975 408 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Gm26099-201ENSMUST00000157248 109 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Gm5967-201ENSMUST00000172723 494 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Sox3P53784 Gm27582-201ENSMUST00000184084 126 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Mir6363-201ENSMUST00000184880 114 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Mir7017-201ENSMUST00000184894 62 ntBASIC2.38□□□□□ -2.03
Sox3P53784 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.38□□□□□ -2.03
Sox3P53784 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Sox3P53784 Gm28779-201ENSMUST00000189678 323 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Gm37807-201ENSMUST00000194310 190 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Mir6925-201ENSMUST00000197857 70 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Gm43901-201ENSMUST00000203247 453 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Gm43955-201ENSMUST00000204332 142 ntBASIC2.38□□□□□ -2.03
Sox3P53784 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms