Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm24998-201ENSMUST00000157908 89 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm22675-201ENSMUST00000158430 104 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm22839-201ENSMUST00000158436 304 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm25163-201ENSMUST00000158905 104 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.59□□□□□ -1.99
Nkx2-1P50220 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Nkx2-1P50220 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm23977-201ENSMUST00000177871 74 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm18403-201ENSMUST00000192907 529 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm37715-201ENSMUST00000193206 235 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm17966-201ENSMUST00000193453 594 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm43355-201ENSMUST00000196541 346 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Mir6375-201ENSMUST00000197176 95 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm43899-201ENSMUST00000203675 246 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm45772-201ENSMUST00000212961 240 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm29818-201ENSMUST00000218070 165 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm17890-201ENSMUST00000221419 757 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Nkx2-1P50220 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm2710-201ENSMUST00000073196 603 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Gm23736-201ENSMUST00000082553 75 ntBASIC2.59□□□□□ -1.99
Nkx2-1P50220 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.59□□□□□ -2
Nkx2-1P50220 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.59□□□□□ -2
Nkx2-1P50220 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nkx2-1P50220 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Nkx2-1P50220 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nkx2-1P50220 Gm25316-201ENSMUST00000116826 118 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm15399-201ENSMUST00000118055 724 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm11522-201ENSMUST00000120533 176 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm14629-201ENSMUST00000122428 144 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.58□□□□□ -2
Nkx2-1P50220 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.58□□□□□ -2
Nkx2-1P50220 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.58□□□□□ -2
Nkx2-1P50220 Gm22098-201ENSMUST00000157930 85 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm22242-201ENSMUST00000175224 118 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Spin2g-201ENSMUST00000178425 687 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm22851-201ENSMUST00000178741 94 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.58□□□□□ -2
Nkx2-1P50220 Gm27313-201ENSMUST00000183500 142 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm42647-201ENSMUST00000195939 459 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.58□□□□□ -2
Nkx2-1P50220 Gm19202-201ENSMUST00000198096 808 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm44149-201ENSMUST00000204256 226 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm45105-201ENSMUST00000207824 397 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm7692-201ENSMUST00000213534 409 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm46233-201ENSMUST00000217831 449 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm19326-201ENSMUST00000219818 326 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm23093-201ENSMUST00000083450 102 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Nkx2-1P50220 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Nkx2-1P50220 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nkx2-1P50220 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.58□□□□□ -2
Nkx2-1P50220 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
Nkx2-1P50220 Gm14940-201ENSMUST00000119309 495 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Gm14877-201ENSMUST00000119803 478 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
Nkx2-1P50220 Gm14821-201ENSMUST00000121975 435 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.57□□□□□ -2
Nkx2-1P50220 Gm24439-201ENSMUST00000157894 117 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Gm25335-201ENSMUST00000158043 103 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.57□□□□□ -2
Nkx2-1P50220 Mir6926-201ENSMUST00000184562 68 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Gm19140-201ENSMUST00000209790 421 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Nkx2-1P50220 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nkx2-1P50220 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm7853-201ENSMUST00000100708 478 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm23530-201ENSMUST00000104564 137 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms