Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm22584-201ENSMUST00000177935 92 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
Col2a1P28481 Gm23379-201ENSMUST00000180026 107 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm26652-202ENSMUST00000181672 475 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.31□□□□□ -2.04
Col2a1P28481 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col2a1P28481 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.31□□□□□ -2.04
Col2a1P28481 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.31□□□□□ -2.04
Col2a1P28481 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm7407-201ENSMUST00000208301 568 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col2a1P28481 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col2a1P28481 Gm22723-201ENSMUST00000083820 129 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.31□□□□□ -2.04
Col2a1P28481 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col2a1P28481 Gm22072-201ENSMUST00000116850 121 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm15176-201ENSMUST00000117734 135 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm15183-201ENSMUST00000118933 348 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm12891-201ENSMUST00000119358 240 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm12044-201ENSMUST00000120335 213 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm22733-201ENSMUST00000158094 91 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm24211-201ENSMUST00000158264 107 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.3□□□□□ -2.04
Col2a1P28481 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.3□□□□□ -2.04
Col2a1P28481 Gm23648-201ENSMUST00000180301 107 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm28597-201ENSMUST00000187664 666 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col2a1P28481 Gm28927-201ENSMUST00000191528 272 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm29389-201ENSMUST00000191562 352 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm42622-201ENSMUST00000197229 355 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.3□□□□□ -2.04
Col2a1P28481 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.3□□□□□ -2.04
Col2a1P28481 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Col2a1P28481 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col2a1P28481 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
Col2a1P28481 Gm23506-201ENSMUST00000083077 107 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm22293-201ENSMUST00000083314 109 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm25124-201ENSMUST00000083345 164 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm24490-201ENSMUST00000083803 98 ntBASIC2.3□□□□□ -2.04
Col2a1P28481 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.3□□□□□ -2.04
Col2a1P28481 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col2a1P28481 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.3□□□□□ -2.04
Col2a1P28481 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col2a1P28481 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Mir883a-201ENSMUST00000104824 76 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm22486-201ENSMUST00000116815 137 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm11845-201ENSMUST00000117886 327 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm12509-201ENSMUST00000118033 609 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm15113-201ENSMUST00000119280 836 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm2005-201ENSMUST00000120759 542 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm11438-201ENSMUST00000121582 189 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm23234-201ENSMUST00000157304 134 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm22083-201ENSMUST00000157586 102 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm25334-201ENSMUST00000158036 110 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm25488-201ENSMUST00000158728 118 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm24315-201ENSMUST00000177835 127 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm7094-201ENSMUST00000178379 366 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.29□□□□□ -2.04
Col2a1P28481 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm32175-201ENSMUST00000193641 346 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm43708-201ENSMUST00000198857 961 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm45146-201ENSMUST00000207108 221 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.29□□□□□ -2.04
Col2a1P28481 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col2a1P28481 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col2a1P28481 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.29□□□□□ -2.04
Col2a1P28481 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 Gm24889-201ENSMUST00000104388 132 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 Gm12045-201ENSMUST00000122122 573 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Col2a1P28481 Gm26177-201ENSMUST00000178683 107 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.28□□□□□ -2.04
Col2a1P28481 Gm38261-201ENSMUST00000192608 316 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 Gm43550-201ENSMUST00000200597 303 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 Gm8249-201ENSMUST00000219225 465 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.28□□□□□ -2.04
Col2a1P28481 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Col2a1P28481 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col2a1P28481 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col2a1P28481 Snora33-201ENSMUST00000093556 129 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms