Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm22632-201ENSMUST00000178266 79 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm28148-201ENSMUST00000186924 697 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm42647-201ENSMUST00000195939 459 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm45420-201ENSMUST00000211243 425 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 CT030645.1-201ENSMUST00000224020 231 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Mecom-201ENSMUST00000061088 348 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm24762-201ENSMUST00000083689 104 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd9P28357 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd9P28357 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd9P28357 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Hoxd9P28357 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd9P28357 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd9P28357 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd9P28357 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Hoxd9P28357 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm22936-201ENSMUST00000103955 126 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm11367-201ENSMUST00000117802 120 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm12902-201ENSMUST00000118389 322 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm5391-201ENSMUST00000121155 613 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm14303-201ENSMUST00000121320 171 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm25393-201ENSMUST00000157336 285 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm25605-201ENSMUST00000158364 124 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm22139-201ENSMUST00000158747 105 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd9P28357 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hoxd9P28357 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm17159-201ENSMUST00000169043 482 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm22069-201ENSMUST00000179911 107 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm29610-201ENSMUST00000187749 453 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm44054-201ENSMUST00000203814 372 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm17811-201ENSMUST00000206193 387 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm44563-201ENSMUST00000207958 178 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.25□□□□□ -1.73
Hoxd9P28357 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 AC154527.5-201ENSMUST00000224448 496 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm24152-201ENSMUST00000082764 163 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm26495-201ENSMUST00000083152 137 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Gm26314-201ENSMUST00000083891 107 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd9P28357 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.25□□□□□ -1.73
Hoxd9P28357 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd9P28357 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd9P28357 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd9P28357 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm14073-201ENSMUST00000117344 381 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm5396-201ENSMUST00000121222 532 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm22789-201ENSMUST00000157884 130 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm25456-201ENSMUST00000157952 109 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm25162-201ENSMUST00000158906 159 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm22243-201ENSMUST00000178754 120 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm17966-201ENSMUST00000193453 594 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm37836-201ENSMUST00000195875 175 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm45392-201ENSMUST00000210441 214 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.24□□□□□ -1.73
Hoxd9P28357 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hoxd9P28357 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd9P28357 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.24□□□□□ -1.73
Hoxd9P28357 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd9P28357 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Hoxd9P28357 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Hoxd9P28357 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm12304-201ENSMUST00000120312 385 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm12926-201ENSMUST00000121158 409 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.23□□□□□ -1.73
Hoxd9P28357 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm26414-201ENSMUST00000157674 269 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm16546-201ENSMUST00000159442 355 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm22775-201ENSMUST00000177630 120 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm24308-201ENSMUST00000177773 114 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm23569-201ENSMUST00000180120 120 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Mir6899-201ENSMUST00000184798 64 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm37670-201ENSMUST00000193622 229 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm42830-201ENSMUST00000196642 313 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm4644-201ENSMUST00000197587 400 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Hoxd9P28357 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC4.23□□□□□ -1.73
Hoxd9P28357 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Hoxd9P28357 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Hoxd9P28357 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Hoxd9P28357 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd9P28357 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms