Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Pde6bP23440 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Pde6bP23440 Gm23063-201ENSMUST00000102350 93 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm24281-201ENSMUST00000104234 136 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm14714-201ENSMUST00000119743 439 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.54□□□□□ -1.68
Pde6bP23440 Gm6265-201ENSMUST00000149263 231 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm24005-201ENSMUST00000158459 296 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm25447-201ENSMUST00000158997 128 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm24106-201ENSMUST00000175498 127 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm37997-201ENSMUST00000193515 267 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.54□□□□□ -1.68
Pde6bP23440 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Pde6bP23440 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.54□□□□□ -1.68
Pde6bP23440 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.54□□□□□ -1.68
Pde6bP23440 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Pde6bP23440 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Pde6bP23440 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Pde6bP23440 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Pde6bP23440 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Pde6bP23440 Gm26075-201ENSMUST00000104062 121 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm11874-201ENSMUST00000117437 130 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm15760-201ENSMUST00000119553 283 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm11718-201ENSMUST00000119942 537 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm15263-201ENSMUST00000121556 642 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm11931-201ENSMUST00000121630 447 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm13868-201ENSMUST00000122411 294 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm22501-201ENSMUST00000158981 127 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.53□□□□□ -1.68
Pde6bP23440 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Pde6bP23440 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Spin2g-201ENSMUST00000178425 687 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm37713-201ENSMUST00000191746 198 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm6615-201ENSMUST00000199426 631 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm8820-201ENSMUST00000204077 571 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm25078-201ENSMUST00000082530 107 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Gm26457-201ENSMUST00000082678 78 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Mir34b-201ENSMUST00000083558 84 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Mir132-201ENSMUST00000083603 66 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Pde6bP23440 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Pde6bP23440 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.53□□□□□ -1.68
Pde6bP23440 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Pde6bP23440 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.53□□□□□ -1.69
Pde6bP23440 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.53□□□□□ -1.69
Pde6bP23440 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Pde6bP23440 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pde6bP23440 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pde6bP23440 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pde6bP23440 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pde6bP23440 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pde6bP23440 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pde6bP23440 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Pde6bP23440 Gm13386-201ENSMUST00000117677 124 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm13541-201ENSMUST00000119519 283 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm26187-201ENSMUST00000157693 101 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm24997-201ENSMUST00000157910 105 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm25223-201ENSMUST00000158200 110 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Mir5129-201ENSMUST00000174938 78 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm23816-201ENSMUST00000179617 132 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.52□□□□□ -1.69
Pde6bP23440 Gm27465-201ENSMUST00000184290 91 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm43402-201ENSMUST00000197159 159 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.52□□□□□ -1.69
Pde6bP23440 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.52□□□□□ -1.69
Pde6bP23440 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Pde6bP23440 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.52□□□□□ -1.69
Pde6bP23440 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.52□□□□□ -1.69
Pde6bP23440 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.52□□□□□ -1.69
Pde6bP23440 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pde6bP23440 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Pde6bP23440 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Pde6bP23440 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Pde6bP23440 Gm15377-201ENSMUST00000119594 246 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm25283-201ENSMUST00000157272 77 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm23098-201ENSMUST00000157552 299 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm22098-201ENSMUST00000157930 85 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm22968-201ENSMUST00000157955 118 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm22314-201ENSMUST00000158007 281 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.51□□□□□ -1.69
Pde6bP23440 Gm18520-201ENSMUST00000174783 658 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm25071-201ENSMUST00000175232 70 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm22308-201ENSMUST00000177609 107 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.51□□□□□ -1.69
Pde6bP23440 Gm10292-201ENSMUST00000183142 581 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm28267-201ENSMUST00000191093 265 ntBASIC4.51□□□□□ -1.69
Pde6bP23440 Gm18956-201ENSMUST00000192857 480 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms