Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
Col1a1P11087 Gm14898-201ENSMUST00000120202 645 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Gm22478-201ENSMUST00000122570 154 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Col1a1P11087 Gm22603-201ENSMUST00000157603 96 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col1a1P11087 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Col1a1P11087 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Col1a1P11087 Gm20811-201ENSMUST00000190500 553 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Gm37337-201ENSMUST00000192601 993 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Trbv6-201ENSMUST00000193743 276 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Mir219b-201ENSMUST00000198317 65 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Col1a1P11087 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.38□□□□□ -2.19
Col1a1P11087 Gm3442-201ENSMUST00000216808 710 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Gm4921-201ENSMUST00000219804 992 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.38□□□□□ -2.19
Col1a1P11087 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Col1a1P11087 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Col1a1P11087 Mir221-201ENSMUST00000083488 95 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.38□□□□□ -2.19
Col1a1P11087 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col1a1P11087 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col1a1P11087 Gm7164-201ENSMUST00000117503 450 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm25185-201ENSMUST00000157754 96 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm22945-201ENSMUST00000158557 157 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm21139-201ENSMUST00000186594 877 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Col1a1P11087 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col1a1P11087 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col1a1P11087 AC159380.1-201ENSMUST00000218096 121 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col1a1P11087 Gm23705-201ENSMUST00000104370 130 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm14770-201ENSMUST00000122197 312 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm13131-201ENSMUST00000122228 321 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm24632-201ENSMUST00000122770 323 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm24060-201ENSMUST00000157494 95 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm26371-201ENSMUST00000157829 104 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm19932-201ENSMUST00000177033 313 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Col1a1P11087 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Col1a1P11087 Gm27869-201ENSMUST00000184327 122 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm37979-201ENSMUST00000193065 712 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm37801-201ENSMUST00000194754 274 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm44358-201ENSMUST00000196301 98 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 Gm19202-201ENSMUST00000198096 808 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.37□□□□□ -2.19
Col1a1P11087 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col1a1P11087 Gm24126-201ENSMUST00000104111 106 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 Gm26421-201ENSMUST00000104279 132 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 Mir3096-201ENSMUST00000116685 71 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col1a1P11087 Gm22389-201ENSMUST00000158193 301 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 Mir7079-201ENSMUST00000184697 69 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col1a1P11087 Gm7858-201ENSMUST00000190177 622 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 Gm29740-201ENSMUST00000193182 655 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 AC126043.1-201ENSMUST00000221304 1141 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.36□□□□□ -2.19
Col1a1P11087 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col1a1P11087 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col1a1P11087 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col1a1P11087 Gm16373-201ENSMUST00000129517 303 ntBASIC1.35□□□□□ -2.19
Col1a1P11087 Gm25898-201ENSMUST00000158303 106 ntBASIC1.35□□□□□ -2.19
Col1a1P11087 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Col1a1P11087 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col1a1P11087 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col1a1P11087 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.35□□□□□ -2.19
Col1a1P11087 Mir6381-201ENSMUST00000183426 87 ntBASIC1.35□□□□□ -2.19
Col1a1P11087 Gm7897-201ENSMUST00000193981 554 ntBASIC1.35□□□□□ -2.19
Col1a1P11087 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.35□□□□□ -2.19
Col1a1P11087 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.35□□□□□ -2.19
Col1a1P11087 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col1a1P11087 Gm26493-201ENSMUST00000083155 136 ntBASIC1.35□□□□□ -2.19
Col1a1P11087 Gm22740-201ENSMUST00000083439 109 ntBASIC1.35□□□□□ -2.19
Col1a1P11087 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Col1a1P11087 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col1a1P11087 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col1a1P11087 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col1a1P11087 Mir667-201ENSMUST00000102441 92 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 Gm6954-201ENSMUST00000117416 225 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 Gm11429-201ENSMUST00000119089 144 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Col1a1P11087 Gm23008-201ENSMUST00000158946 80 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 Gm27520-201ENSMUST00000184872 81 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Col1a1P11087 Gm31230-201ENSMUST00000199725 785 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 Gm45146-201ENSMUST00000207108 221 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
Col1a1P11087 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 AC158392.1-201ENSMUST00000223720 1069 ntBASIC1.34□□□□□ -2.19
Col1a1P11087 CT025525.3-201ENSMUST00000228858 366 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms