Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col5a1O88207 Snord104-201ENSMUST00000083192 70 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Gm24261-201ENSMUST00000083744 104 ntBASIC1.8□□□□□ -2.12
Col5a1O88207 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm23431-201ENSMUST00000104006 107 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm22960-201ENSMUST00000122517 104 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm26271-201ENSMUST00000158349 104 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm8292-201ENSMUST00000162574 396 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm23568-201ENSMUST00000177960 92 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm24829-201ENSMUST00000179245 92 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm28956-201ENSMUST00000189047 427 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm45687-201ENSMUST00000209454 155 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col5a1O88207 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC1.79□□□□□ -2.12
Col5a1O88207 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col5a1O88207 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col5a1O88207 Gm25813-201ENSMUST00000082748 191 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm42721-201ENSMUST00000197165 1523 ntBASIC1.79□□□□□ -2.12
Col5a1O88207 Gm14751-201ENSMUST00000117693 222 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm14517-201ENSMUST00000119040 337 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm13574-201ENSMUST00000120482 394 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col5a1O88207 Gm26393-201ENSMUST00000157625 129 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm22841-201ENSMUST00000158443 62 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Col5a1O88207 Gm22307-201ENSMUST00000180019 107 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Mir6393-201ENSMUST00000183709 94 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Mir6394-201ENSMUST00000184738 99 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm28597-201ENSMUST00000187664 666 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.78□□□□□ -2.12
Col5a1O88207 Gm29184-201ENSMUST00000190038 334 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
Col5a1O88207 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.78□□□□□ -2.12
Col5a1O88207 Gm44938-201ENSMUST00000208614 427 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm45742-201ENSMUST00000212400 433 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.78□□□□□ -2.12
Col5a1O88207 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Gm23939-201ENSMUST00000082880 133 ntBASIC1.78□□□□□ -2.12
Col5a1O88207 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Col5a1O88207 Gm26473-201ENSMUST00000116763 127 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm15176-201ENSMUST00000117734 135 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm13627-201ENSMUST00000119700 706 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm16100-201ENSMUST00000120489 231 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm25888-201ENSMUST00000157778 302 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm24211-201ENSMUST00000158264 107 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm25831-201ENSMUST00000158924 163 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm11392-201ENSMUST00000181419 710 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm27236-201ENSMUST00000184147 442 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm44011-201ENSMUST00000203336 394 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm44128-201ENSMUST00000204909 219 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.77□□□□□ -2.13
Col5a1O88207 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 AC165146.1-201ENSMUST00000223777 900 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm22810-201ENSMUST00000082741 158 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Mir200b-201ENSMUST00000083615 70 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col5a1O88207 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Col5a1O88207 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Col5a1O88207 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col5a1O88207 Gm23691-201ENSMUST00000101878 107 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm11845-201ENSMUST00000117886 327 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm15266-201ENSMUST00000119635 255 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm11834-201ENSMUST00000122257 585 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm25334-201ENSMUST00000158036 110 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col5a1O88207 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col5a1O88207 Gm5900-201ENSMUST00000179862 375 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm29550-201ENSMUST00000185543 285 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col5a1O88207 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col5a1O88207 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.77□□□□□ -2.13
Col5a1O88207 Gm19457-201ENSMUST00000200995 448 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm43911-201ENSMUST00000203097 76 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm44990-201ENSMUST00000203922 217 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm45192-201ENSMUST00000206749 283 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Gm20304-201ENSMUST00000218168 444 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms