Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm17937-201ENSMUST00000197908 742 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.28□□□□□ -2.2
Cacna1bO55017 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Cacna1bO55017 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.21
Cacna1bO55017 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.28□□□□□ -2.21
Cacna1bO55017 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cacna1bO55017 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.27□□□□□ -2.21
Cacna1bO55017 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm22766-201ENSMUST00000158372 99 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm8161-201ENSMUST00000168739 481 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Mir466m-201ENSMUST00000175052 84 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Cacna1bO55017 Mir7663-201ENSMUST00000183950 61 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm20811-201ENSMUST00000190500 553 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm45023-201ENSMUST00000207951 379 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm23249-201ENSMUST00000083369 161 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm13046-201ENSMUST00000117391 501 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm12313-201ENSMUST00000121347 421 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm22478-201ENSMUST00000122570 154 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm22563-201ENSMUST00000157333 269 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm27248-201ENSMUST00000184004 166 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cacna1bO55017 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.27□□□□□ -2.21
Cacna1bO55017 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm13731-201ENSMUST00000117332 196 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm12386-201ENSMUST00000117380 688 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm22839-201ENSMUST00000158436 304 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm25901-201ENSMUST00000158494 130 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Nron-204ENSMUST00000158971 370 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm27522-201ENSMUST00000183949 230 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm28196-201ENSMUST00000187719 640 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm45173-201ENSMUST00000206819 305 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm45456-201ENSMUST00000210841 243 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm7065-201ENSMUST00000222150 474 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Cacna1bO55017 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm22293-201ENSMUST00000083314 109 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm24252-201ENSMUST00000083700 132 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm25495-201ENSMUST00000104431 131 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm12697-201ENSMUST00000118008 667 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm27999-201ENSMUST00000183539 193 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm43510-201ENSMUST00000197922 353 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm44520-201ENSMUST00000205447 802 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Gm18892-201ENSMUST00000217628 881 ntBASIC1.26□□□□□ -2.21
Cacna1bO55017 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Cacna1bO55017 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cacna1bO55017 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
Cacna1bO55017 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cacna1bO55017 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm23431-201ENSMUST00000104006 107 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm11252-201ENSMUST00000120572 939 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
Cacna1bO55017 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm25247-201ENSMUST00000175475 90 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Mir6904-201ENSMUST00000183443 67 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm6801-201ENSMUST00000190697 339 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.25□□□□□ -2.21
Cacna1bO55017 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cacna1bO55017 Mir196b-201ENSMUST00000083509 85 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.25□□□□□ -2.21
Cacna1bO55017 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cacna1bO55017 Gm15037-201ENSMUST00000120358 259 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm23886-201ENSMUST00000122684 313 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm3104-201ENSMUST00000171004 473 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Mir3112-201ENSMUST00000175431 82 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm20948-201ENSMUST00000211091 449 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm19563-201ENSMUST00000222031 270 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.24□□□□□ -2.21
Cacna1bO55017 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm25759-201ENSMUST00000103988 129 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm14238-201ENSMUST00000120227 323 ntBASIC1.24□□□□□ -2.21
Cacna1bO55017 Gm14069-201ENSMUST00000120815 229 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms