Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm13737-201ENSMUST00000119793 232 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm12466-201ENSMUST00000121199 620 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm23957-201ENSMUST00000157209 90 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm25390-201ENSMUST00000157341 103 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm22145-201ENSMUST00000157396 148 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm26085-201ENSMUST00000157900 116 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm22308-201ENSMUST00000177609 107 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm27568-201ENSMUST00000184220 99 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm37713-201ENSMUST00000191746 198 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm37089-201ENSMUST00000195616 129 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm35702-201ENSMUST00000198653 511 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm32222-201ENSMUST00000203296 298 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm23928-201ENSMUST00000082469 145 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm25078-201ENSMUST00000082530 107 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Pcdh1F7BJK1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm24423-201ENSMUST00000101982 106 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm24172-201ENSMUST00000104127 117 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm24671-201ENSMUST00000104159 158 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Mir294-201ENSMUST00000104710 84 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm13714-201ENSMUST00000117313 221 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm12417-201ENSMUST00000119153 403 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm16218-201ENSMUST00000155424 388 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm22561-201ENSMUST00000157331 84 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm24720-201ENSMUST00000157518 166 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm25162-201ENSMUST00000158906 159 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm15796-201ENSMUST00000162135 204 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm7909-201ENSMUST00000182688 614 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm27718-201ENSMUST00000183721 86 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm29657-201ENSMUST00000189807 342 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm37763-201ENSMUST00000193445 120 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Mecom-201ENSMUST00000061088 348 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm9795-201ENSMUST00000062156 693 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm23454-201ENSMUST00000083332 133 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh1F7BJK1 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm24544-201ENSMUST00000103862 110 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm13729-201ENSMUST00000120328 406 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm22726-201ENSMUST00000158089 179 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm17100-201ENSMUST00000168963 272 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Mir6338-201ENSMUST00000183389 109 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm27690-201ENSMUST00000184596 126 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm27564-201ENSMUST00000185196 96 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm36964-201ENSMUST00000191876 198 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Mir5121-201ENSMUST00000198528 74 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm44259-201ENSMUST00000204996 298 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm7422-201ENSMUST00000220115 640 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm25800-201ENSMUST00000082636 134 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.66□□□□□ -1.82
Pcdh1F7BJK1 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Pcdh1F7BJK1 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms