Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm28155-201ENSMUST00000191066 151 ntBASIC0.84□□□□□ -2.27
Col6a3E9PWQ3 Gm37449-201ENSMUST00000193016 270 ntBASIC0.84□□□□□ -2.27
Col6a3E9PWQ3 Gm18658-201ENSMUST00000195558 270 ntBASIC0.84□□□□□ -2.27
Col6a3E9PWQ3 Gm45367-201ENSMUST00000210171 347 ntBASIC0.84□□□□□ -2.27
Col6a3E9PWQ3 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Col6a3E9PWQ3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
Col6a3E9PWQ3 Gm22075-201ENSMUST00000158599 192 ntBASIC0.84□□□□□ -2.27
Col6a3E9PWQ3 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm2066-201ENSMUST00000118046 389 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm2318-201ENSMUST00000119623 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm2005-201ENSMUST00000120759 542 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm1989-201ENSMUST00000126244 636 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm22646-201ENSMUST00000175130 115 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm7438-201ENSMUST00000177664 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm7408-201ENSMUST00000178014 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm7386-201ENSMUST00000178020 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm3657-201ENSMUST00000178170 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm7415-201ENSMUST00000178205 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm7398-201ENSMUST00000178589 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm7391-201ENSMUST00000178680 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm2092-201ENSMUST00000178887 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm7375-201ENSMUST00000179232 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm2759-201ENSMUST00000179938 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm3681-201ENSMUST00000179940 639 ntBASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.28
Col6a3E9PWQ3 Gm17064-201ENSMUST00000167690 452 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Mir6896-201ENSMUST00000198033 73 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Gm43198-201ENSMUST00000200927 326 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 AC132954.1-201ENSMUST00000221017 342 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Gm24401-201ENSMUST00000157868 91 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Gm37290-201ENSMUST00000195775 339 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Gm3496-201ENSMUST00000188283 745 ntBASIC0.83□□□□□ -2.28
Col6a3E9PWQ3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm2288-201ENSMUST00000118560 638 ntBASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm14980-201ENSMUST00000121247 736 ntBASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm25625-201ENSMUST00000157221 96 ntBASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm22485-201ENSMUST00000157990 109 ntBASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm24551-201ENSMUST00000158645 92 ntBASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm23205-201ENSMUST00000158671 103 ntBASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Gm29553-201ENSMUST00000189692 279 ntBASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Col6a3E9PWQ3 Mir191-201ENSMUST00000196210 74 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm23036-201ENSMUST00000157885 99 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm25772-201ENSMUST00000158574 56 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm18558-201ENSMUST00000186253 1214 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm44332-201ENSMUST00000203712 433 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm37598-201ENSMUST00000194506 1301 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm12327-201ENSMUST00000121729 1168 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Mir6380-201ENSMUST00000184334 81 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm33354-201ENSMUST00000195448 906 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm7407-201ENSMUST00000208301 568 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm11351-202ENSMUST00000225724 478 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm24018-201ENSMUST00000083232 107 ntBASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.81□□□□□ -2.28
Col6a3E9PWQ3 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Gm6591-201ENSMUST00000121063 434 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Gm22337-201ENSMUST00000157721 132 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Gm16038-201ENSMUST00000159317 193 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Gm2446-201ENSMUST00000220144 772 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Snord13-201ENSMUST00000157627 104 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.8□□□□□ -2.28
Col6a3E9PWQ3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Gm24372-201ENSMUST00000104400 110 ntBASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Gm27943-201ENSMUST00000184844 116 ntBASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 CT025157.1-201ENSMUST00000226241 292 ntBASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Gm29475-201ENSMUST00000190767 312 ntBASIC0.79□□□□□ -2.28
Col6a3E9PWQ3 Mir1892-201ENSMUST00000197752 80 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms