Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm37431-201ENSMUST00000195102 111 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm35857-201ENSMUST00000212739 178 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm24152-201ENSMUST00000082764 163 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Mir215-201ENSMUST00000083628 112 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Prpf40aQ9R1C7 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Prpf40aQ9R1C7 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm12902-201ENSMUST00000118389 322 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm12719-201ENSMUST00000118859 241 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm5937-201ENSMUST00000119715 643 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm10059-201ENSMUST00000131139 171 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm23982-201ENSMUST00000157141 106 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm17052-201ENSMUST00000165496 289 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm24308-201ENSMUST00000177773 114 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm30341-201ENSMUST00000194363 289 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Mir376a-201ENSMUST00000197584 68 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm26166-201ENSMUST00000083788 107 ntBASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Prpf40aQ9R1C7 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm24282-201ENSMUST00000104232 66 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm23960-201ENSMUST00000157206 131 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm26085-201ENSMUST00000157900 116 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm23781-201ENSMUST00000157940 308 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm22968-201ENSMUST00000157955 118 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm25863-201ENSMUST00000158249 329 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm25051-201ENSMUST00000158602 249 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm43427-201ENSMUST00000198188 331 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Mir202-201ENSMUST00000083568 72 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.82□□□□□ -1.64
Prpf40aQ9R1C7 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm12466-201ENSMUST00000121199 620 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm16303-201ENSMUST00000161498 390 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm27568-201ENSMUST00000184220 99 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm5329-201ENSMUST00000186898 463 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm1833-201ENSMUST00000191608 682 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm43704-201ENSMUST00000196164 496 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm44259-201ENSMUST00000204996 298 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.81□□□□□ -1.64
Prpf40aQ9R1C7 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm24116-201ENSMUST00000103975 107 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm13504-201ENSMUST00000117490 316 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm24997-201ENSMUST00000157910 105 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm22381-201ENSMUST00000158186 107 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Mir6963-201ENSMUST00000183535 71 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Mir6410-201ENSMUST00000184204 104 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm27805-201ENSMUST00000184513 79 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm37997-201ENSMUST00000193515 267 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Mir465d-201ENSMUST00000196314 58 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm44337-201ENSMUST00000196553 114 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm40810-201ENSMUST00000219149 253 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 Gm9616-201ENSMUST00000221154 781 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.8□□□□□ -1.64
Prpf40aQ9R1C7 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms