Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm11430-201ENSMUST00000121317 217 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm25624-201ENSMUST00000157222 275 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm22666-201ENSMUST00000158717 164 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Mir7667-201ENSMUST00000183866 63 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm27991-201ENSMUST00000184804 137 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm37989-201ENSMUST00000195202 803 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm43007-201ENSMUST00000197618 291 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm43979-201ENSMUST00000203179 475 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm44088-201ENSMUST00000204595 237 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm45754-201ENSMUST00000212380 279 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Olfr197-201ENSMUST00000080031 926 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trem3Q9JKE1 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Mir1193-201ENSMUST00000116761 121 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm13087-201ENSMUST00000118298 256 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm11598-201ENSMUST00000119257 357 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm11575-201ENSMUST00000122243 228 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm26365-201ENSMUST00000179177 94 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm5900-201ENSMUST00000179862 375 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm37993-201ENSMUST00000195301 988 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm45013-201ENSMUST00000206883 178 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm18991-201ENSMUST00000209225 746 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm19326-201ENSMUST00000219818 326 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm24948-201ENSMUST00000082866 207 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trem3Q9JKE1 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm26077-201ENSMUST00000104064 123 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm22674-201ENSMUST00000104413 131 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm23551-201ENSMUST00000116852 121 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm12191-201ENSMUST00000118307 348 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm7429-201ENSMUST00000118664 348 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm14049-201ENSMUST00000121009 636 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm14770-201ENSMUST00000122197 312 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm16359-201ENSMUST00000124511 289 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm22192-201ENSMUST00000175128 85 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm27722-201ENSMUST00000183908 76 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm33354-201ENSMUST00000195448 906 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm5317-201ENSMUST00000204445 847 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm44585-201ENSMUST00000207150 607 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm25788-201ENSMUST00000082721 131 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm25632-201ENSMUST00000083112 85 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.38□□□□□ -2.19
Trem3Q9JKE1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm2348-201ENSMUST00000108782 300 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm15312-201ENSMUST00000118827 271 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm14867-201ENSMUST00000120156 866 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Trav20-201ENSMUST00000142754 347 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm22382-201ENSMUST00000158185 130 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm7634-201ENSMUST00000185778 553 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm29011-201ENSMUST00000191059 712 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms