Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Smco4Q9JIS3 AC142113.2-201ENSMUST00000217425 748 ntBASIC0.7□□□□□ -2.3
Smco4Q9JIS3 AC141642.1-201ENSMUST00000220598 229 ntBASIC0.7□□□□□ -2.3
Smco4Q9JIS3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Smco4Q9JIS3 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Smco4Q9JIS3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.7□□□□□ -2.3
Smco4Q9JIS3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm16458-201ENSMUST00000121428 502 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm16147-201ENSMUST00000162143 373 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm23415-201ENSMUST00000175519 83 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Mir6993-201ENSMUST00000184912 65 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm45023-201ENSMUST00000207951 379 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Gm35558-202ENSMUST00000221819 499 ntBASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.69□□□□□ -2.3
Smco4Q9JIS3 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Smco4Q9JIS3 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm6461-201ENSMUST00000120015 633 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm14366-201ENSMUST00000121970 730 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm14903-201ENSMUST00000122435 537 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC0.68□□□□□ -2.3
Smco4Q9JIS3 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Smco4Q9JIS3 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm19280-201ENSMUST00000190191 205 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm37934-201ENSMUST00000192902 402 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm44844-201ENSMUST00000207242 336 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Gm44910-201ENSMUST00000208451 396 ntBASIC0.68□□□□□ -2.3
Smco4Q9JIS3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm42635-201ENSMUST00000200266 2571 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm2869-201ENSMUST00000124359 2621 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm22488-201ENSMUST00000116811 127 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm11344-201ENSMUST00000122011 335 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm22099-201ENSMUST00000157925 123 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm24902-201ENSMUST00000158126 123 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm24925-201ENSMUST00000178157 107 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm27161-201ENSMUST00000183960 562 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Mir7226-201ENSMUST00000184953 60 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm45146-201ENSMUST00000207108 221 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm9068-201ENSMUST00000217393 455 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Gm42701-201ENSMUST00000196117 1657 ntBASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
Smco4Q9JIS3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm23336-201ENSMUST00000117023 123 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm14923-201ENSMUST00000118270 155 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm20386-201ENSMUST00000174010 132 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm27271-201ENSMUST00000183509 170 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm27640-201ENSMUST00000184580 147 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm29397-201ENSMUST00000185205 333 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm28466-201ENSMUST00000190678 659 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 AC113031.2-201ENSMUST00000226132 579 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Smco4Q9JIS3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
Smco4Q9JIS3 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm6956-201ENSMUST00000134724 546 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm22217-201ENSMUST00000157556 313 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm24959-201ENSMUST00000157924 146 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm26029-201ENSMUST00000158659 132 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Snord87-201ENSMUST00000175437 87 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm25730-201ENSMUST00000178753 165 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Npn2-202ENSMUST00000189275 235 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm37684-201ENSMUST00000192779 355 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC0.65□□□□□ -2.31
Smco4Q9JIS3 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm25079-201ENSMUST00000082529 203 ntBASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Smco4Q9JIS3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm23950-201ENSMUST00000104026 129 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm24632-201ENSMUST00000122770 323 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm24780-201ENSMUST00000157635 143 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm22136-201ENSMUST00000158751 268 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm9071-201ENSMUST00000165915 474 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm43510-201ENSMUST00000197922 353 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms