Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx2-4Q9EQM3 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nkx2-4Q9EQM3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx2-4Q9EQM3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nkx2-4Q9EQM3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Mir344c-201ENSMUST00000103919 92 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm14823-201ENSMUST00000117698 238 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm15760-201ENSMUST00000119553 283 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm25270-201ENSMUST00000122606 138 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm23169-201ENSMUST00000157157 112 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm3104-201ENSMUST00000171004 473 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21842-201ENSMUST00000177552 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21626-201ENSMUST00000177791 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21562-201ENSMUST00000177888 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21539-201ENSMUST00000177925 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm17522-201ENSMUST00000178144 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21599-201ENSMUST00000178249 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21914-201ENSMUST00000178452 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21723-201ENSMUST00000178692 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21916-201ENSMUST00000178771 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21801-201ENSMUST00000178865 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21633-201ENSMUST00000178941 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21821-201ENSMUST00000179646 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm26180-201ENSMUST00000179942 107 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21588-201ENSMUST00000180074 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21780-201ENSMUST00000180128 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21572-201ENSMUST00000180134 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm21529-201ENSMUST00000180175 498 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm9022-202ENSMUST00000183285 483 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Mir6383-201ENSMUST00000184545 116 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm27505-201ENSMUST00000185071 110 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm29370-202ENSMUST00000187476 499 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm43521-201ENSMUST00000197838 255 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm43107-201ENSMUST00000198729 255 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm44041-201ENSMUST00000203678 396 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm44060-201ENSMUST00000204440 410 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm44887-201ENSMUST00000208980 178 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Gm22061-201ENSMUST00000082557 107 ntBASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx2-4Q9EQM3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm11859-201ENSMUST00000118099 455 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm11785-201ENSMUST00000120165 601 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm25781-201ENSMUST00000122527 84 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm12238-201ENSMUST00000127764 124 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm25392-201ENSMUST00000157335 297 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm16569-201ENSMUST00000160526 314 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm25707-201ENSMUST00000175120 96 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm26622-201ENSMUST00000180520 298 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm7858-201ENSMUST00000190177 622 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm37743-201ENSMUST00000194645 376 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm44468-201ENSMUST00000199516 105 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm45375-201ENSMUST00000210338 280 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm7692-201ENSMUST00000213534 409 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Gm22577-201ENSMUST00000083731 109 ntBASIC3.34□□□□□ -1.87
Nkx2-4Q9EQM3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Nkx2-4Q9EQM3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Nkx2-4Q9EQM3 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.34□□□□□ -1.88
Nkx2-4Q9EQM3 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.34□□□□□ -1.88
Nkx2-4Q9EQM3 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm22021-201ENSMUST00000104353 107 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Mir1898-201ENSMUST00000122643 83 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm26101-201ENSMUST00000157246 105 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm23671-201ENSMUST00000157472 103 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm26187-201ENSMUST00000157693 101 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm22187-201ENSMUST00000157819 129 ntBASIC3.33□□□□□ -1.88
Nkx2-4Q9EQM3 Gm22664-201ENSMUST00000158719 105 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms