Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm42832-201ENSMUST00000196361 745 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm43393-201ENSMUST00000200147 194 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm2676-201ENSMUST00000207279 606 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm18703-201ENSMUST00000215318 333 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm23627-201ENSMUST00000082459 107 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm22502-201ENSMUST00000082488 107 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm24149-201ENSMUST00000082757 107 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm24928-201ENSMUST00000083399 107 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm25897-201ENSMUST00000083709 107 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm23847-201ENSMUST00000083829 110 ntBASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc9Q8VC31 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Ccdc9Q8VC31 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm22486-201ENSMUST00000116815 137 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm12149-201ENSMUST00000117511 654 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm13076-201ENSMUST00000118041 204 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm15268-201ENSMUST00000118845 352 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm14731-201ENSMUST00000119216 376 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm15799-201ENSMUST00000120899 289 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm14980-201ENSMUST00000121247 736 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm14564-201ENSMUST00000122159 294 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm7209-201ENSMUST00000122339 333 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm25107-201ENSMUST00000122472 129 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm24736-201ENSMUST00000158862 130 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm36934-201ENSMUST00000192007 306 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm37239-201ENSMUST00000193510 141 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm6105-201ENSMUST00000200580 624 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm43991-201ENSMUST00000203751 274 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm45048-201ENSMUST00000207058 429 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm5265-201ENSMUST00000076828 342 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm25205-201ENSMUST00000082841 103 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc9Q8VC31 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm23577-201ENSMUST00000103950 110 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm7164-201ENSMUST00000117503 450 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm11794-201ENSMUST00000119446 237 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm14845-201ENSMUST00000121259 306 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm25945-201ENSMUST00000122484 135 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm25784-201ENSMUST00000122524 81 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm14364-201ENSMUST00000129209 267 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm26276-201ENSMUST00000157099 109 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm25706-201ENSMUST00000157828 247 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm23545-201ENSMUST00000158205 104 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm26988-201ENSMUST00000183296 945 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm27699-201ENSMUST00000183553 180 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm10105-201ENSMUST00000184601 270 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Npn2-202ENSMUST00000189275 235 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm43355-201ENSMUST00000196541 346 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm43723-201ENSMUST00000196886 189 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm42475-201ENSMUST00000201212 295 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm44611-201ENSMUST00000207507 355 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm21007-201ENSMUST00000221024 326 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm26225-201ENSMUST00000082508 135 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.82□□□□□ -1.8
Ccdc9Q8VC31 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm23691-201ENSMUST00000101878 107 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Mir883a-201ENSMUST00000104824 76 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm14292-201ENSMUST00000118761 456 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm23124-201ENSMUST00000157650 107 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm22765-201ENSMUST00000158371 128 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Mir6353-201ENSMUST00000183596 113 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm9696-202ENSMUST00000191541 830 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm37746-201ENSMUST00000193249 198 ntBASIC3.81□□□□□ -1.8
Ccdc9Q8VC31 Gm45438-201ENSMUST00000210242 564 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms