Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm2855-201ENSMUST00000166765 456 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm24137-201ENSMUST00000180055 79 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm22391-201ENSMUST00000180356 79 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm27379-201ENSMUST00000183730 123 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm27761-201ENSMUST00000184091 131 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Mir7k-201ENSMUST00000184115 110 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm42805-201ENSMUST00000196158 276 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm45101-201ENSMUST00000208327 232 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm29817-201ENSMUST00000210098 172 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm45879-201ENSMUST00000212521 392 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.53□□□□□ -2
Vps39Q8R5L3 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm10025-201ENSMUST00000079568 372 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm22247-201ENSMUST00000082476 131 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm25404-201ENSMUST00000082970 107 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Vps39Q8R5L3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Vps39Q8R5L3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.53□□□□□ -2
Vps39Q8R5L3 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.53□□□□□ -2.01
Vps39Q8R5L3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Vps39Q8R5L3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm6587-201ENSMUST00000120219 613 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm12044-201ENSMUST00000120335 213 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Mir3964-201ENSMUST00000174898 74 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm23402-201ENSMUST00000178130 107 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm28745-201ENSMUST00000190069 305 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm43114-201ENSMUST00000198298 343 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm43171-201ENSMUST00000199882 291 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm44212-201ENSMUST00000205016 897 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm9762-201ENSMUST00000036976 444 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.52□□□□□ -2.01
Vps39Q8R5L3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm16428-201ENSMUST00000121193 723 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm24908-201ENSMUST00000157294 127 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm24958-201ENSMUST00000158009 97 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm38311-201ENSMUST00000192945 165 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm37533-201ENSMUST00000193848 545 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm43286-201ENSMUST00000197420 424 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm5670-201ENSMUST00000093546 372 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.51□□□□□ -2.01
Vps39Q8R5L3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm25414-201ENSMUST00000101814 107 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm22151-201ENSMUST00000116963 58 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm16021-201ENSMUST00000121176 219 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm12639-201ENSMUST00000121400 493 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm22483-201ENSMUST00000157986 274 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm23033-201ENSMUST00000157996 134 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm26173-201ENSMUST00000158416 136 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm25365-201ENSMUST00000158852 121 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm17064-201ENSMUST00000167690 452 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm18417-201ENSMUST00000176564 648 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm24897-201ENSMUST00000179033 107 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm4076-201ENSMUST00000179230 965 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm27505-201ENSMUST00000185071 110 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm19089-201ENSMUST00000197207 613 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm44393-201ENSMUST00000197418 138 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Vps39Q8R5L3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Vps39Q8R5L3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.5□□□□□ -2.01
Vps39Q8R5L3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms