Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Gm3956-201ENSMUST00000164882 2560 ntBASIC4□□□□□ -1.77
Ushbp1Q8R370 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ushbp1Q8R370 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm23213-201ENSMUST00000122715 313 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm26460-201ENSMUST00000175061 126 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm23725-201ENSMUST00000177876 107 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm28717-201ENSMUST00000189950 315 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm44336-201ENSMUST00000203696 468 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm6012-201ENSMUST00000210821 730 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm25141-201ENSMUST00000083177 107 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm23297-201ENSMUST00000083184 127 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Olfr575-201ENSMUST00000084812 957 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.99□□□□□ -1.77
Ushbp1Q8R370 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm14825-201ENSMUST00000113538 701 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm14622-201ENSMUST00000117117 468 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm15026-201ENSMUST00000119219 458 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm12118-201ENSMUST00000119766 532 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm14852-201ENSMUST00000120065 647 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm23214-201ENSMUST00000122716 157 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm12238-201ENSMUST00000127764 124 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm24577-201ENSMUST00000158580 63 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm26141-201ENSMUST00000175299 126 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm28995-201ENSMUST00000186625 261 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm28951-201ENSMUST00000190742 313 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm2189-201ENSMUST00000201419 429 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm44472-201ENSMUST00000204922 943 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm10237-201ENSMUST00000078393 273 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm26446-201ENSMUST00000082455 103 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm22061-201ENSMUST00000082557 107 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm24522-201ENSMUST00000083964 108 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm10161-201ENSMUST00000091506 204 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.98□□□□□ -1.77
Ushbp1Q8R370 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm12235-201ENSMUST00000118596 170 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm15760-201ENSMUST00000119553 283 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm12412-201ENSMUST00000121867 328 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm24504-201ENSMUST00000157679 100 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm23977-201ENSMUST00000177871 74 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm37575-201ENSMUST00000195467 309 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm19620-201ENSMUST00000195972 434 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm19244-201ENSMUST00000204340 253 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm44858-201ENSMUST00000207360 154 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm45344-201ENSMUST00000211610 341 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm25411-201ENSMUST00000083760 151 ntBASIC3.97□□□□□ -1.77
Ushbp1Q8R370 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ushbp1Q8R370 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm26278-201ENSMUST00000157098 132 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm22037-201ENSMUST00000157280 296 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm18551-201ENSMUST00000195594 642 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Mir3970-201ENSMUST00000199287 90 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm36776-201ENSMUST00000207006 203 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 Gm44927-201ENSMUST00000207573 716 ntBASIC3.96□□□□□ -1.78
Ushbp1Q8R370 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.96□□□□□ -1.78
Ushbp1Q8R370 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms